EST details — SGN-E227073
Search information |
Request: 227073 | Match: SGN-E227073 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C17542 | Clone name: cLED-1-A15 |
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Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C17542 [cLED-1-A15] | Trace: SGN-T48586 | EST: SGN-E227074 | Direction: 3' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E227073 | Length: 384 bp (780 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E227073 [] (trimmed)
GGAAGAGATGTCTTCAATGAAAAGCCACCTCCTGATGAACTTTTGGCCGTATCTGACATTGGGAAGTCCGTTACTACATCCCTTCCAGATAATGT
GATCATGCATACCAGTATGGGTGACATTCATATGAAGCTATACCCTGAAGAGTGTCCAAAAACAGTGGAGAACTTTACAACACACTGCAGGAATG
GATACTATGATAATTTGATATTTCATCGGGTCATCAGAGGCTTTATGGTTCAGACAGGAGATCCATTAGGAGATGGCACGGGTGGCCAATCTATT
TGGGGAAGGGAGTTTGAAGATGAGTTCCATAAAAGTCTGCGACATGATAGACCCTTCACTGTCTCGATGGCTAATGCTGGGCCAAACACAAATGG
CTCT
GATCATGCATACCAGTATGGGTGACATTCATATGAAGCTATACCCTGAAGAGTGTCCAAAAACAGTGGAGAACTTTACAACACACTGCAGGAATG
GATACTATGATAATTTGATATTTCATCGGGTCATCAGAGGCTTTATGGTTCAGACAGGAGATCCATTAGGAGATGGCACGGGTGGCCAATCTATT
TGGGGAAGGGAGTTTGAAGATGAGTTCCATAAAAGTCTGCGACATGATAGACCCTTCACTGTCTCGATGGCTAATGCTGGGCCAAACACAAATGG
CTCT
Unigenes |
Current Unigene builds | |||||
[SGN-E227073] | SGN-U564509 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T48585 [Download] [View] | Facility Assigned ID: TOVAA08TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0010 | Quality Trim Threshold: 14.5 |