EST details — SGN-E228030
Search information |
Request: 228030 | Match: SGN-E228030 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C20482 | Clone name: cLED-2-K17 |
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Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E228030 | Length: 515 bp (786 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E228030 [] (trimmed)
AAAAAGTCAATACAAGAGAGCAGAATCCACCTGCATAACCCAGCTTCAAACACCTGTTAAGCTTATTCGGCCATCTTTGATTGTGTTAATAAAGG
AATGAGGCAATGGGATCAATGATCACTTCACCTCAGTTTAGCAAAGAACAAATGGAGGCCGCTCTTACCAAAGCCAAGCAGATCGTTTCCTCTAA
TCCTGTTGTCGCATTCAGTGAAACATACTGCGGATATTGCACAACGGTGAAGAAACTTCTTTCCCAGCTTGGTGCTACTTTTAAAGTTATTGAAC
TTGACCGGGAAAGTGATGGAGATGAGGTTCACGCAGCATTACTAGAATGGACTAAGCAGAGGACTGTGCCTAACCTGTTTATTGGGGGAGAACAT
GTTGGTTGCTGCGACAGCGTATTAAAGAATCATCAACAGGGCAAGCTACTTCCCATGCTGAAGGACGCCGCTGCTATTCCCAACAATTCTGCCAA
AGTCTAGAACTCATCTATGCACTCTAGTAGTCAACCTGAC
AATGAGGCAATGGGATCAATGATCACTTCACCTCAGTTTAGCAAAGAACAAATGGAGGCCGCTCTTACCAAAGCCAAGCAGATCGTTTCCTCTAA
TCCTGTTGTCGCATTCAGTGAAACATACTGCGGATATTGCACAACGGTGAAGAAACTTCTTTCCCAGCTTGGTGCTACTTTTAAAGTTATTGAAC
TTGACCGGGAAAGTGATGGAGATGAGGTTCACGCAGCATTACTAGAATGGACTAAGCAGAGGACTGTGCCTAACCTGTTTATTGGGGGAGAACAT
GTTGGTTGCTGCGACAGCGTATTAAAGAATCATCAACAGGGCAAGCTACTTCCCATGCTGAAGGACGCCGCTGCTATTCCCAACAATTCTGCCAA
AGTCTAGAACTCATCTATGCACTCTAGTAGTCAACCTGAC
Unigenes |
Current Unigene builds | |||||
[SGN-E228030] | SGN-U586356 | Tomato 200607 | Build 2 | 22 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T48678 [Download] [View] | Facility Assigned ID: TOVAE69TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.977 | Expected Error Rate: 0.0272 | Quality Trim Threshold: 14.5 |