EST details — SGN-E228193

Search information 
Request: 228193Match: SGN-E228193
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C20564Clone name: cLED-2-O9
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C183994 is on microarray TOM1: SGN-S1-1-1.2.18.5
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183994 [TUS-43-J24] Trace: SGN-T199925 EST: SGN-E398599 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E228193Length: 558 bp (707 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E228193 [] (trimmed) CAGGCAAAGGAGTGTCTGACGAACGGACAGTCAAAACGAATTATAGATCCCAATCTTGTTGGCCAAATAAGACCAGATTCCCTCGGGAGGTTTGG
AGAAACAGCGGTGAAATGCTTAGCTGATACTGGCGTTGACTGGCCATCAATGGGTGAGGTGCTGCCTAAACTGGACTATGCACTTCATCTCTAAT
AGCCTGTCATTCAAGAAAACACTGCCATCCCTATTTGCGAGCAAATCAAAGATTTCAGTCATGTTGATGACACTTCCTCTGCTGCTTCCGTCAAA
ATTGGGCTGATCTCTAATATGAATGCGTTCAGATTTTGCTCAAGAAAACAGCCGGGAGAAGTTCAATTAATGGGTGCACTCCATGGGAACCAACT
ATTGCAAGCCAACAACTTGCATGAATGATGCTTCCAATTTGAGTAATCGCGTCCCTTTCGAAAGTGTTCGAGTTCCTTTTGTAGATTTGCAGGAA
GCAACTAATAACTGTGATGACAAGTTACTGATTGGAGTGGGTTTATTTGGTAAGGTGTACAGGGGTGTTTTGCGTGATGGTAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E228193] SGN-U594169 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T48841 [Download] [View] Facility Assigned ID: TOVAE89TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0260 Quality Trim Threshold: 14.5