| SGN ID: SGN-C22900 | Clone name: cLED-3-O7 |  | Order Clone |
|
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone
SGN-C181133 is on microarray TOM1: SGN-S1-1-6.3.14.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Sequence Id: SGN-E228352 | Length: 569 bp (774 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E228352 [] (trimmed)
GCGCACCAGAGCTTTCTAAAATCAAGAATGCAAGCACCAAGACTGATGTCTACAGTCTTGGAGTGATCATTTTGGAGCTCTTAACAGGAAAATCC
CCTAGCGAGGCAACGGATGGTCTCGATTTGCCTCAGTGGGTAGCTTCCATTGTGAAAGAGGAGTGGACTAATGAAGTGTTTGATGTGGAACTTAT
GAGGGATGCACCTAATATTGGTGATGAGTTGCTTAACACATTGAAACTAGCTTTACATTGTGTTGATCCTACACCAACTGCTCGACCCGAAGCTC
CGCAAGTACTACAGAAATTGGAGGAGATAAAACCAGAGATGATGTTAGCAGCTACTAGTTCTGGAGATGATGGCACAACAGTTCAAGAAAAGAGT
GATGAATAAACTCTGCTGCAGTTTTGGAATTTTTGAGCTTTTCACTTGATATCTATTTGTTTATTCTTTCATTTATTTTTACAGTTAGTAGTAGA
AATGTTGTTTCATATTAAGATCTACTAGTAAACTGTATATAGGAGATTGTGATTGCTTGCATAGGTTTTACTGGTGAAGAAAAATATTTATTCA
[BLAST] [AA Translate]
| SGN-ID: SGN-T49000 [Download] [View] |
Facility Assigned ID: TOVAI88TH
|
| Submitter: Koni |
Sequencing Facility: TIGR |
Funding Organization: National Science Foundation
| Processed By: SGN |
Basecalling Software: phred |
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
| Sequence Entropy: 0.957 |
Expected Error Rate: 0.0117 |
Quality Trim Threshold: 12.5 |
