EST details — SGN-E228439

Search information 
Request: 228439Match: SGN-E228439
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C22780Clone name: cLED-3-G17
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C181127 is on microarray TOM1: SGN-S1-1-4.3.15.20
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C181127 [TUS-36-C13] Trace: SGN-T187621 EST: SGN-E375063 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E228439Length: 551 bp (865 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E228439 [] (trimmed) CAGCAACGCCAATCCTCCTTCCATGGCTTTGACAATTCATCTTCTTTATCCAAATCGTTTCCCTTCACAATTCACAAACTCCCAAACCAATTTGG
TCCCTTCGATGTATACCTTCAAGAATCATCCCAAGTTTCACAAAGTCTCGTGCACCAACAACGACGACGACATGAACGATATTGACCTGGCATCA
GATTTTGCAACAGAGGTTGGAAAGATGAACACCCAGATGATACAGAAAGAGGAAGCGTTGAAGAAAAGCAAAGAGCTTTTGTTCGTTGAGTTTTG
CCACTACACGGGATTGAAATCGGAGGAAATGAAGAAGAAATGGAAGAAGTTCAGTGAGGAGGAACAATGGGATTTGGTTAAAAGTTTTGTTTTAG
AATGGGGTGCCCATTTTCATCCATTATCTGCGAGGTCTGTTAAAGAATTAGTCGATGAGTACTTAGTTGAAAACATTTCTGAGTTCAATTCTTCT
ACTTCTTCTTCTTCTTCTTCTTTTTTCCCTGGTCTCAAAAAAATTGATGGGATTTTCAGGGGATGATAATGAATAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E228439] SGN-U581176 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T49087 [Download] [View] Facility Assigned ID: TOVAI45TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0043 Quality Trim Threshold: 14.5