EST details — SGN-E235376

Search information 
Request: 235376Match: SGN-E235376
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C15417Clone name: cLED-11-N7
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175524 is on microarray TOM1: SGN-S1-1-7.2.13.12
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175524 [TUS-21-J2] Trace: SGN-T190660 EST: SGN-E378046 Direction: 3' Facility: INRA
Clone: SGN-C175524 [TUS-21-J2] Trace: SGN-T190661 EST: SGN-E378047 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E235376Length: 594 bp (816 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E235376 [] (trimmed) GATGATATTTACTCGATCCATCGGAAGGATGCAGTGAAGATGACGAGGTCGGCAGCCCGACATTCTAAGGCTGCCAGTGAGGCCTATCTCAGAGG
AGACCACTTATCTGCCCAACATTTTTCTCTAAAAGCCCAAGAAGAGTGGGATGCTGCTAATAGGCTAAATGCCCAGGCTGCAAAAGAAATTTTGA
CTGCCTGCAACGGTAAGAATGATCAATGGACACTGGACTTGCATGGTCTTCATGCAAAAGAGGCAGTTCAAGCCTTACAAGAACATTTGCAAAAG
ATTGAATCTCAGGTGGCACAGAATAAGCGCAGCTTTGGAGCTGCTGTCTCTTTTGATGTGGAGAATGAGAGCAAAGGGTCCCACCTATTGAATAA
GCAGCGGCCAGCTTTCTTAGAGGTCATAACAGGTAAAGGTATTCATAGCCGGGGACAAGCTGCACTTCCAATGGCTATAAGAAGCTTTCTCGTGG
AGAAGGGATATCGTTATGAGGAGACAAGGCCCGGGGTGATCACAGTTAGACCCAAGTTCCGACCACGATAAATACGTTCATATGTATATTTTGGG
TCCCAATTTAGTGCATTTGTTTCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E235376] SGN-U572767 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T51386 [Download] [View] Facility Assigned ID: TOVBQ76TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0033 Quality Trim Threshold: 14.5