EST details — SGN-E235422

Search information 
Request: 235422Match: SGN-E235422
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C15445Clone name: cLED-11-P12
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175539 is on microarray TOM1: SGN-S1-1-8.2.13.20
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175539 [TUS-21-J17] Trace: SGN-T190601 EST: SGN-E377839 Direction: 3' Facility: INRA
Clone: SGN-C175539 [TUS-21-J17] Trace: SGN-T190602 EST: SGN-E377840 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E235422Length: 651 bp (777 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E235422 [] (trimmed) AGAACAAAAAAAAAAAACACTCAAAGAGATTATAATAATTATTTTTTTTTACCAAAAAAAAGCAAAATTAAGATGGGAGAAGTGATAATATATGT
TGATGATTATGAATTTTTTTCTTCTTCAACATATTTATGTAGAATTTGCCATGACGAAGAATTCGAAAGTTGTAAGAAATTAGAAGCTCCATGTG
CATGTTCTGGAACTGTTAAGTTTGCACACAGGGATTGTATTCAAAAATGGTGTAATGAAAAAGGAAACACAATTTGCGAAATTTGTTTACAGAAA
TTTGAACCAGGATATACGGCTCCACCTCCTAAGAAGAAGGCCCACTTGGTTGATAATAATAATAATAATACAGCTGCAATTATTAGAGGAAGCGT
AGAAGCAGATATAGAAAACGGAAGGGAAAGAGTAGAGTCGGATTCAGAATCAGAAGAAAGAGAAATGCTGGTGAGGAGTACTCAGTATTATGAAT
GCTCACAAGCTGCTGATAGAAGCGCGTCTTGCTGTCGAACTATTGCTCTTATCTTCACAATTCTGCTTATGATGAGACATTTGTTAGAGGTGATG
AATGGAGGAGCAAAAAACTATCCCTTTACACTTCCTACATTGCTAATTTTTAAATCAACTGGAATACTCTTGCCCATGTAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E235422] SGN-U586496 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T51432 [Download] [View] Facility Assigned ID: TOVBR90TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.942 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5