EST details — SGN-E235979

Search information 
Request: 235979Match: SGN-E235979
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C16306Clone name: cLED-16-A20
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E235979Length: 495 bp (805 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E235979 [] (trimmed) GCAAATTTCAGGTTGTCTATATTGGAGATGGAAATAACATAGTGCATTCTTGGTTGCTACTTGCTTCAGTAATTCCTTTCCACTTTGTATGTGCT
TGTCCAAAAGGTTTTGAACCTGATGAAGAAACAGTTAAGAAAGCACAAGATGCTGGAATCAGCAAAATCGAGATAACTAATGATCCAAAGGAAGC
AATTAGAGGAGCTGATGTTGTATATTCTGATGTCTGGGCGAGTATGGGACAAAAAGAAGAAGCTGCACAGCGTCGTCAGGTGTTTCAAGGATTCC
AGGTTGGAGTGTGATAAATTTCTAAGCTCTATCTAGTCTATTCGACTTGTGCATGTAGTACAAGACACCTATTCATATATACATAAAATTGCTTG
CCAGGAAAGCAGGCAAACCCAGTAGTATAGGAGGCTAGTGCCCCTCGATGTTGATGCTTTTATGAATACCCATCTAAAAGTTTTGCTGTTCTTGA
ATTCCTTTTTAGCTAGTATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E235979] SGN-U575133 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T52552 [Download] [View] Facility Assigned ID: TOVCJ10TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0074 Quality Trim Threshold: 14.5