EST details — SGN-E238301

Search information 
Request: 238301Match: SGN-E238301
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C16635Clone name: cLED-17-C13
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175723 is on microarray TOM1: SGN-S1-1-8.2.11.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175723 [TUS-22-B9] Trace: SGN-T180743 EST: SGN-E367994 Direction: 3' Facility: INRA
Clone: SGN-C175723 [TUS-22-B9] Trace: SGN-T180744 EST: SGN-E367995 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E238301Length: 362 bp (1156 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E238301 [] (trimmed) CAGATAACATCAAATACTCTGCTTCTAGTTAAGGCAATGGCAGCACACGGTGTAAAAACACTAATCTATTCAAGTACTTGTGCAACATATGGAGA
GCCTGAGAAAATGCCTATTACGGAAGTGACTCCACAATCCCCAATAAATCCATATGGAAAAGCAAAGAAAATGGCTGAAGATATCATATTGGACT
TCTCAAAGACTTCAGATATGGCTGTCATGATTTTAAGGTACTTCAATGTGATTGGCTCGGATCCTGAAGGAAGGTTAGGAGAAGCTCCGCCCCCA
GAATTACGTGAGCAAGGTCGGATATCTGGTGCTTGGTTTGATGCAGCCAGNGGCATAATTCCAGGATTGAAAATAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E238301] SGN-U573008 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T52743 [Download] [View] Facility Assigned ID: TOVCM19TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0160 Quality Trim Threshold: 14.5