EST details — SGN-E238346

Search information 
Request: 238346Match: SGN-E238346
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C16689Clone name: cLED-17-E22
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C184140 is on microarray TOM1: SGN-S1-1-7.1.16.1
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184140 [TUS-44-A2] Trace: SGN-T1816 EST: SGN-E378319 Direction: 5' Facility: Giov. Lab
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Sequence 
Sequence Id: SGN-E238346Length: 621 bp (894 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E238346 [] (trimmed) GAAACCTAGTGAATTTAGTTGGATACTGTGCTGAGAAGGGTCAGCATATGCTTATCTACGTTTACATGAGCCGAGGCAGTTTAGCTTCTCACTTG
TACGATGAAAAGCTTGAACCATTGCGCTGGGAGTTGAGAGTTCAAATTGCTCTGGATGTGGCTAGGGGCTTAGAGTATCTTCATGACGGGGCAGT
TCCTCCAGTTGTACACCGGGATATTAAATCATCCAATATTTTGTTGGATCAGTCAATGAGTGCCAGAGTTGCTGATTTCGGGCTGTCAAGGGAAG
AAATGGTCAGTAAACATGCATCCAACATCCGTGGAACATTCGGATATCTTGATCCTGAATATATATCAACTAGGTCCTTCACTAAGAAAAGTGAT
GTTTACAGCTTTGGGGTTTTACTATTCGAACTTATTGCTGGTAAAAATCCTCTTCAGGGGCTTATCGAGTATATTGAACTAGCAGCCATGACTAC
AGATGGAAAAGGCGGATGGGAGGAAATCGCAGATTCCCGTCTTGATGGGAAGTATGATCTGCAAGAACTTAATGATGTAGCAGCACTTGCATACA
AATGTGTGAATCGTGCTGCCAAGAAACGGCCTTCCCTGAGGGACACTGTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E238346] SGN-U569939 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T52788 [Download] [View] Facility Assigned ID: TOVCN35TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.982 Expected Error Rate: 0.0050 Quality Trim Threshold: 14.5