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EST details — SGN-E238362

Search information 
Request: 238362Match: SGN-E238362
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C16817Clone name: cLED-17-K4
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175800 is on microarray TOM1: SGN-S1-1-3.1.11.9
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E238362Length: 613 bp (873 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E238362 [] (trimmed) CTTCTTGACTTTTATATCGCAAAATCAAGTTAATGGATTGCAAATCAACAAAAATGGAGAATGGATTGATGTGATTATTTCACCAAATTCTTACG
TTGTTTTGGCCGGTGATTCCTTCAAAGTAAGTATTTTAAGTTTTGAACTAGTGTTACTTATCTTGTTGGGAACTGTTTTGTTTGATTTTTAAAAG
AAAAAATATTAAATGATCAAAAAAATTATAATATCTTTTTTGTTTTAAGGTTAAATAAATTGATTTAAAAATTTCATTTTTAATTAAAAGAGGGT
AGTAAAATGCTTAAAAAGCTAAAATAATTTAGTGTGAAATATATTATTTTATTATCATTCTAATCAAAATTTCTGGTCACACCTTATAGCATAGG
GGTTTCAGAGGGCCCCGAGATATTTTGTTTTGATCTTATATTTCTCGAATCTATGAAAATGTTATTCCACTAGTGTTTATATTATTTTCTGAAAT
GCATATTTTTGAATGATTTGATATATGCTCAATATTTTCATGCAAAACTGAAAATGAATTTTGGTATTATTGACCGTATTTGTATTGTTTTACTC
TCCAAAAATATTATCGATCGCATCTATCTTTGTATTTATACAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E238362] SGN-U577701 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T52804 [Download] [View] Facility Assigned ID: TOVCN62TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.898 Expected Error Rate: 0.0029 Quality Trim Threshold: 14.5