EST details — SGN-E238485

Search information 
Request: 238485Match: SGN-E238485
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C16778Clone name: cLED-17-I7
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E238485Length: 538 bp (860 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E238485 [] (trimmed) AAAAAATGGCAAATTTGTTCATTAAGCAAGCACAACAATATTCAAAGGGTAGGCCAAGTTACCCTCAAGAATTATTCAATTTCATTGCTTCTAAA
ACACCTTCTCATGATCTTGTTTGGGATGTTGGTACTGGTAGTGGCCAGGCTGCTCAATCTTTAGCTAAGCTTTACAAGAATGTGATAGCTACAGA
CACAAGTCCAAAGCAGCTTGAATTTGCAGCAAAGGTTCCAAATGTTCAATACATATGTACCTCTCCTAAGTTGTCAAAATCCGAAATCGAAACAC
AAATAGGATCAGAATCAAGTGTAGATTTAGTAACAATTGCACAAGCAATGCATTGGTTTGATCTACCAACTTTTTATGAACATGTTAAATGGTTA
CTCAAGAAACCAAATGGTGTTATAGCATCATGGTGTTACACTACACCTAAAATAAACAACTCAGTAGATGCAATATTTGATAAATTTTACACAAG
TGATGCTGGACCTTATTGGGAATCACCAAGAAAATTGGCCGATGAAAAGTATGAAACTATTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E238485] SGN-U580752 Tomato 200607 Build 2 98 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T52927 [Download] [View] Facility Assigned ID: TOVCM52TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.946 Expected Error Rate: 0.0048 Quality Trim Threshold: 14.5