EST details — SGN-E238528

Search information 
Request: 238528Match: SGN-E238528
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C16761Clone name: cLED-17-I12
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175778 is on microarray TOM1: SGN-S1-1-1.4.11.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E238528Length: 521 bp (870 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E238528 [] (trimmed) CAGGCGAATACAGTTTTTATGCATTAGAGTGGACTTTGGAACACTTGTTTAGATCTTCACCGGCTACTTTCAAACTCCTTATCGTTCACGCCAAA
CCTACTGCTACTTCTGCCATCGGCCTCGCTGGTCCTGGTATGTATGTATGTATATATTGTATGCAATCAGGTCATGCTGCTGAGAAAATGAATTG
AATTGGCAGGGGGTGCCGATGTTTTGCCCTATGTGGAGGCTGATTTGAGGAAGATCTCTTCATGGATAGCCGATAAAGCTAATAAGATTTGTACT
GCTAAATCGGTAAACGATGTTGTAGGTGAGATTGCGGAAGGTGATGCTCGGAGTGTCTTGTGTGATGCAGTGGACAAGCATCATGCCTGTATGTT
AATTGCTGGTAGGCATGGTTATGGAGTTCTGAAGAGGGCTGTCTTGGGCAGTGTAAGTGACTACTGTGCTCACCACACTCACTGCAGTGTGATGA
TTGTGAAGCGCCCAATGATCAAGGCTTGAGATTTGGTCGATGCTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E238528] SGN-U580613 Tomato 200607 Build 2 31 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T52970 [Download] [View] Facility Assigned ID: TOVCN54TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0329 Quality Trim Threshold: 14.5