EST details — SGN-E238548

Search information 
Request: 238548Match: SGN-E238548
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C16619Clone name: cLED-17-B15
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E238548Length: 615 bp (915 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E238548 [] (trimmed) CAGCAGGAGACCATGTTCTTCCTGTCTTTACAGGGGAATGTAAAGATTGTGCTCACTGTAAATCTGAAGAAAGCAATATGTGTAGCCTCTTAAGG
ATTAACACTGACAGGGGAGTGATGCTTAATGATGGAAAATCAAGATTTTCCATCAATGGAAACCCCATTTACCATTTTGTTGGGACCTCTACTTT
TAGTGAGTACACCGTGGTTCATGTTGGATGTGTTGCAAAAATTAACCCTCTTGCTCCTCTTGACAAAGTATGTGTCCTTAGTTGTGGAATTTCGA
CAGGCCTTGGAGCAAGTTTGAATGTTGCTAAACCAACAAAAGGCTCAAGTGTGGCTATATTTGGACTAGGAGCTGTAGGCCTCGCGGCTGCAGAA
GGAGCCAGAATTGCTGGTGCCTCGAGGATAATTGGTGTTGATTTAAATGCTAGTAGATTTGAGCAAGCTAAGAAATTTGGTGTGACAGAGTTTGT
GAACCCAAAGGACTATAGTAAACCAGTTCAAGAGGTAATTGCTGAGATGACTGATGGCGGAGTCGATAGGAGTGTGGAATGTACTGGTCACATTG
ATGCTATGATTTCACCATTTGAATGTGTCCATGATGGCTGGGGAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E238548] SGN-U579420 Tomato 200607 Build 2 345 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T52990 [Download] [View] Facility Assigned ID: TOVCO08TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0061 Quality Trim Threshold: 14.5