EST details — SGN-E239524
Search information |
Request: 239524 | Match: SGN-E239524 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C18592 | Clone name: cLED-23-P4 |
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Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C169241 [TUS-5-D7] | Trace: SGN-T351041 | EST: SGN-E550166 | Direction: 5' | Facility: Avesthagen |
Sequence |
Sequence Id: SGN-E239524 | Length: 395 bp (967 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E239524 [] (trimmed)
TGGCGTCGTAGCTATGATATTCCTCCTCCGAACGGAGAAAGTTTGGAAATGTGTGCAGAGAGAGCTGTTGCCTACTTCACAGAGCACATTGAACC
CCAACTGGCAAGTGGAAAAAATATAATGATTGCAGCCCATGGGAACTCATTGAGGTCCATCATTATGTATCTTGACAAGCTAACATCCCAAGAGG
TTATAAGTTTGGAGCTTGCCACTGGAATCCCCATGCTTTACATATTCAAAGAAGGAAGGTATATTCGCAGAGGAAGTCCTCCAGCCCCAACTGAG
GCAACAGTCTATGCTTATACAAAGAAATTGGCTCAGTACAGACAAAAGCTAGATGATATGTTTGAGTAACGTGACAAGGGGTTTGCTTTCAGTTG
AAGTAGATTTGATAT
CCAACTGGCAAGTGGAAAAAATATAATGATTGCAGCCCATGGGAACTCATTGAGGTCCATCATTATGTATCTTGACAAGCTAACATCCCAAGAGG
TTATAAGTTTGGAGCTTGCCACTGGAATCCCCATGCTTTACATATTCAAAGAAGGAAGGTATATTCGCAGAGGAAGTCCTCCAGCCCCAACTGAG
GCAACAGTCTATGCTTATACAAAGAAATTGGCTCAGTACAGACAAAAGCTAGATGATATGTTTGAGTAACGTGACAAGGGGTTTGCTTTCAGTTG
AAGTAGATTTGATAT
Unigenes |
Current Unigene builds | |||||
[SGN-E239524] | SGN-U564847 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T54489 [Download] [View] | Facility Assigned ID: TOVDN86TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0122 | Quality Trim Threshold: 14.5 |