EST details — SGN-E240360
Search information |
Request: 240360 | Match: SGN-E240360 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C19114 | Clone name: cLED-25-K4 |
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Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E240360 | Length: 462 bp (712 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E240360 [] (trimmed)
CAGATGCTGTGTTCTTTACTCAAACTTCTAATGGTACCTGGATTCCATGCGGACCGAAGCAACGGGGTGCTGTGCAGACAACTATGCAGGAACTT
GCTGCTAAAGGACTCGCGTCCCAGATCATCCCGCCACCCATTACAAAGACTGATTTTGATAAGGTTCTTGCTCGTCAAAGGCCAACAGTTAGTAA
ATCCGACCTTGAAGTGCATGACAGATTCACGAAGGAATTTGGAGAAGAAGGTTGAAGAGATTGATGTGTTTCCGATAACTACTACGCCTGGAGTT
GCCGTGATTTGTATTTGTTCTCCCTTCTACTTGTCTGAAAAATTTGCGATTTTCAAAGGTTCTTCAAATGGGAGAGATTGACATTGTTTACCTTC
TTGGATTGTATCAGTTTTAGCTTTGCATGTATTTATCAATGTCAAGACAGAACATTTTGCTAGTATTTATGGTGCATTTACT
GCTGCTAAAGGACTCGCGTCCCAGATCATCCCGCCACCCATTACAAAGACTGATTTTGATAAGGTTCTTGCTCGTCAAAGGCCAACAGTTAGTAA
ATCCGACCTTGAAGTGCATGACAGATTCACGAAGGAATTTGGAGAAGAAGGTTGAAGAGATTGATGTGTTTCCGATAACTACTACGCCTGGAGTT
GCCGTGATTTGTATTTGTTCTCCCTTCTACTTGTCTGAAAAATTTGCGATTTTCAAAGGTTCTTCAAATGGGAGAGATTGACATTGTTTACCTTC
TTGGATTGTATCAGTTTTAGCTTTGCATGTATTTATCAATGTCAAGACAGAACATTTTGCTAGTATTTATGGTGCATTTACT
Unigenes |
Current Unigene builds | |||||
[SGN-E240360] | SGN-U573760 | Tomato 200607 | Build 2 | 40 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T55151 [Download] [View] | Facility Assigned ID: TOVDT62TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0119 | Quality Trim Threshold: 12.5 |