Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E240711

Search information 
Request: 240711Match: SGN-E240711
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C18070Clone name: cLED-21-N22
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E240711Length: 561 bp (957 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E240711 [] (trimmed) TTTTTGTTTCTCTACTCCAATTGGGTGTTTTTTGTTTTTCTTTTTGTGTATCCATAAATGGGTAGTGAAACAAAGGTTTATACTTTGCAAGAAGT
AGCTCCTCACAACAATGCCAAAGATTGTTGGCTTGTTATTAGTGGCAAGGTGTACGATGTGACAAAGTTCTTGGACGATCACCCTGGTGGCGATG
AGGTTTTATTAGCTGCTACTGGAAAGGATGCAACCGATGATTTTGAGGATGTTGGTCACAGCAGCAGTGCTCGAGCCATGTTGGACGAGTACTAC
GTAGGGGATATTGATTCAGCAACCATCCCGACTAAAAAGGCGTACACTCCTCCCAATCAGCCTCATTACAATCAGGACAACACATCCGAATTCAT
AATCAAGCTACTCCAGTTCTTAGTTCCCCTGATCATTTTGGGCGTAGCAGTTGGCATCCGCTTCTACACCAAACAATCCTCTTGAAGATTGAATG
CAACGGTAAATAAATTCATAATAAGAGTTCGAATTTGCAAGATGTCACCCTCGATTCAAAAAAATATATATCGAATTTTACTTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E240711] SGN-U576176 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T54112 [Download] [View] Facility Assigned ID: TOVDF83TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0127 Quality Trim Threshold: 12.5