EST details — SGN-E240893

Search information 
Request: 240893Match: SGN-E240893
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C18713Clone name: cLED-24-G1
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C176020 is on microarray TOM1: SGN-S1-1-7.2.11.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176020 [TUS-22-N18] Trace: SGN-T180868 EST: SGN-E368686 Direction: 3' Facility: INRA
Clone: SGN-C176020 [TUS-22-N18] Trace: SGN-T180869 EST: SGN-E368687 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E240893Length: 351 bp (759 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E240893 [] (trimmed) CAGCTCGTCCGGGAAATTTTCCGTCCGTCAATACACTTCCCAAATGTTGTTCGCTTCATCCACATCTCGCCGGCACCGTACCTGGAGACGAACCT
TGTTGTGAGTCATCGAATTTTATCACGGAGTCTCTCTTTTAGTCCGGTTAGGTGTGCGGCGGCGTCCAAAGGTGGTGCTGATGATGGAAAGAAGT
CTCCGGCGCGGCTTGCTCAGGTTCAACAGCTGTTACATGAAGCTAAGGAGCGATCTCAAGCTGCGGGAAACGATCCTATTCCTAAGATTACTCTT
GATCACGTGACTGTCAACTTTGCAAGAAGTGGAGGTCCTGGAGGTCAAAATGTCAATAAAGTAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E240893] SGN-U582833 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T54790 [Download] [View] Facility Assigned ID: TOVDO37TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.988 Expected Error Rate: 0.0168 Quality Trim Threshold: 14.5