EST details — SGN-E241705
| Search information |
| Request: 241705 | Match: SGN-E241705 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C22093 | Clone name: cLED-36-H5 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C169809 [TUS-6-K23] | Trace: SGN-T350533 | EST: SGN-E549658 | Direction: 3' | Facility: Avesthagen |
| Clone: SGN-C169809 [TUS-6-K23] | Trace: SGN-T350591 | EST: SGN-E549716 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E241705 | Length: 475 bp (750 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E241705 [] (trimmed)
CAGATCCTTTTAACAGGTCAAGTTGGATATATAGTTAGCGGAATGCGTTCAACAAAAGAGGCCCGTGTTGGAGATACTCTACATCATACACGAAC
AGTTATACAGCCCCTTCCAGGTTTCAAGCCAGCAAAACATATGGTCTTTTCTGGCCTATATCCAGCTGATGGATCTGATTTTGAGGCACTTAACC
ATGCCATAGAGAGACTGACGTGTAATGATGCCAGTGTCTCTGTAACTAAAGAAAGCAGCACAGCTCTAGGTCTGGGTTTCAGATGTGGTTTCTTG
GGCTTACTTCACATGGATGTTTTTCATCAGCGACTTGAGCAGGCATGTTCATTAAGTCATTTTACAATGTATTTGCCTCAGCTATAACCTAGATT
GATGAATATCAGACAAGGAAGACCACCTATCTTTGGCATAAGGAATTACTTCTCCAGATGTTGGTCTCTCTTGTTGGAACCTCTCTCTCTCTCTT
AGTTATACAGCCCCTTCCAGGTTTCAAGCCAGCAAAACATATGGTCTTTTCTGGCCTATATCCAGCTGATGGATCTGATTTTGAGGCACTTAACC
ATGCCATAGAGAGACTGACGTGTAATGATGCCAGTGTCTCTGTAACTAAAGAAAGCAGCACAGCTCTAGGTCTGGGTTTCAGATGTGGTTTCTTG
GGCTTACTTCACATGGATGTTTTTCATCAGCGACTTGAGCAGGCATGTTCATTAAGTCATTTTACAATGTATTTGCCTCAGCTATAACCTAGATT
GATGAATATCAGACAAGGAAGACCACCTATCTTTGGCATAAGGAATTACTTCTCCAGATGTTGGTCTCTCTTGTTGGAACCTCTCTCTCTCTCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E241705] | SGN-U586459 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T57875 [Download] [View] | Facility Assigned ID: TOVFM39TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0100 | Quality Trim Threshold: 14.5 |
Working
