EST details — SGN-E242122
| Search information |
| Request: 242122 | Match: SGN-E242122 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C22264 | Clone name: cLED-37-G22 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C169883 [TUS-6-O1] | Trace: SGN-T350540 | EST: SGN-E549665 | Direction: 3' | Facility: Avesthagen |
| Clone: SGN-C169883 [TUS-6-O1] | Trace: SGN-T350623 | EST: SGN-E549748 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E242122 | Length: 289 bp (710 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E242122 [] (trimmed)
TTTTAAAATGAAACATATATTACAGATCATTAATCATAGTAGTAGTGTTACAAACATGTAAAGCACAAAATATGGGTACTAATGGAGAAATTACA
AATAAACATATGTAACCTGGTTTTAGAGAATATACAGAAAGAATGAGTGATCAACCAATTAAAGACTGAAAGAATCAAATAAAGCAGAAACAAAA
CAATGAGACAAAGTAGCAACTAGGTGTCTTAACTGAAGAGTGATCACTTTATGAGATAGAGATAGTAATAAGTATTAGTTGAGTGACGAGTACTA
GCAA
AATAAACATATGTAACCTGGTTTTAGAGAATATACAGAAAGAATGAGTGATCAACCAATTAAAGACTGAAAGAATCAAATAAAGCAGAAACAAAA
CAATGAGACAAAGTAGCAACTAGGTGTCTTAACTGAAGAGTGATCACTTTATGAGATAGAGATAGTAATAAGTATTAGTTGAGTGACGAGTACTA
GCAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E242122] | SGN-U566130 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T57943 [Download] [View] | Facility Assigned ID: TOVFP47TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.913 | Expected Error Rate: 0.0148 | Quality Trim Threshold: 14.5 |
Working
