EST details — SGN-E244235
Search information |
Request: 244235 | Match: SGN-E244235 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C26124 | Clone name: cLEF-37-I11 |
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Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C26124 [cLEF-37-I11] | Trace: SGN-T59824 | EST: SGN-E244234 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E244235 | Length: 551 bp (828 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E244235 [] (trimmed)
GAGAAAACAAACTACAATTGATACATAGAACTCAGGAAGAGAAACAGCATGAGGGGTGTTACCCACAGTACACTCTTACAGATAAGGCAGTCATT
ATTCTACAACTGCAAAAACATAGTAGGCCCTGGTCGAAATTTTGATAAGAGACAATTCAAATATTTGGTGTAGAGTTGAATCATAGAACGATAAG
ATCAATCCGTTGTGTACAGAAAATGCTTATTGTTTGGTCAGTGAACTACTTTCACAGTTACACACCAGCATATGATTGTGCTCCTTCCAAGGATT
GGCATTAGACCCGTCAAAACTCAGCCTTAAACAGGTAAAATTAATGCTTCCTTGAAGTAGGATCTTCTCCATCTTCATTCAAGTGCTCACGATTT
TCAGGTCTTCTAGAAATTTCCCAACTCCTTTTCTCATCTGCTGAAGACAACTTCTTAAGATCGTATGTTTCCTCCTTTTCTGACATTCTTACATC
TTTCTTCCCAGCAATTGAAGTTCCAGTCTCCGTAAATTTATCTAATACCTGAAAGTTTCCATCTTTTTGGAATGCT
ATTCTACAACTGCAAAAACATAGTAGGCCCTGGTCGAAATTTTGATAAGAGACAATTCAAATATTTGGTGTAGAGTTGAATCATAGAACGATAAG
ATCAATCCGTTGTGTACAGAAAATGCTTATTGTTTGGTCAGTGAACTACTTTCACAGTTACACACCAGCATATGATTGTGCTCCTTCCAAGGATT
GGCATTAGACCCGTCAAAACTCAGCCTTAAACAGGTAAAATTAATGCTTCCTTGAAGTAGGATCTTCTCCATCTTCATTCAAGTGCTCACGATTT
TCAGGTCTTCTAGAAATTTCCCAACTCCTTTTCTCATCTGCTGAAGACAACTTCTTAAGATCGTATGTTTCCTCCTTTTCTGACATTCTTACATC
TTTCTTCCCAGCAATTGAAGTTCCAGTCTCCGTAAATTTATCTAATACCTGAAAGTTTCCATCTTTTTGGAATGCT
Unigenes |
Current Unigene builds | |||||
[SGN-E244235] | SGN-U565729 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T59825 [Download] [View] | Facility Assigned ID: TMGFO54TV |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.949 | Expected Error Rate: 0.0084 | Quality Trim Threshold: 14.5 |