Notice: Due to a regional power outage, SGN was briefly unavailable on Saturday, Feb 4. We apologize for the inconvenience.

EST details — SGN-E244617

Search information 
Request: 244617Match: SGN-E244617
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C22557Clone name: cLED-38-J4
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C184175 is on microarray TOM1: SGN-S1-1-4.2.16.5
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184175 [TUS-44-B13] Trace: SGN-T198242 EST: SGN-E396916 Direction: 5' Facility: INRA
Clone: SGN-C184175 [TUS-44-B13] Trace: SGN-T199970 EST: SGN-E398644 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E244617Length: 356 bp (822 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E244617 [] (trimmed) CTTTTTCTCTCAACAGACAGAAAGAAACCTTAAATTACCAAACTTCAGTTAATTAAACACAAAAATGGATTGGGTTAGAGGTGAAACAGTTGGCC
ATGGAAGCTTTGGCAAAGTTAGTTTTGTGATTCCGAGAAACCAGAGTACTCTGTTTTCTCCATCAATGGTGGTTAAGTCTTGTTCCGCTTCCTGC
TCAGCTACTTTGATGAACGAGAAGATAATCTTGGATGAACTTAAGGGGTGCCCACAAATAATCAATTGCGTTGGTGACAGCTACAGTTATGAAAA
TGGCGAAAAGCTATACAATGTCTTGTTGGAGTATGCTTGTGGGGGTGCTTTGTCGGATAAATTAAAGAATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E244617] SGN-U582791 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T58229 [Download] [View] Facility Assigned ID: TOVFV50TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0065 Quality Trim Threshold: 14.5