EST details — SGN-E246083
| Search information |
| Request: 246083 | Match: SGN-E246083 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26432 | Clone name: cLEF-40-G13 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176315 is on microarray TOM1: SGN-S1-1-8.3.11.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176315 [TUS-23-K1] | Trace: SGN-T181072 | EST: SGN-E369498 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176315 [TUS-23-K1] | Trace: SGN-T181073 | EST: SGN-E369499 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246083 | Length: 641 bp (867 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246083 [] (trimmed)
ACAAAAGAACAACACTGTATGACATTATAAAGAGATTATGAACTCAAGTATGGAAACTCCATTACTTTTTCAGCCAATTCCTCCTATGGTAATAG
AAGAAATAATTCATGGGCAGACTAAAAGCCCCTTTCAGGATAAGAACTTGACTAATTACAAACATTGTAAATACCCCATTTTCATGTTACTGAGC
TTCAACAATCTCTAAGCCTTGCACACCAACAAGTCCAGAAATGTTCTAAGATTGTGGATACACCTTCCTTTTCACAAGCTTGGCATGCACTCACA
TTGCATATATGATCTCCCCGCTGCTATCAATATCAAGATCAGGCTCTGAATCCAAGTCATCCATGTCATCGTCCATCATTTCCAAGTTATACAAG
CCAATTGGTGGTACTGTTGCCTCTGAGATTATTTGCATGATCGTATCAATGCTCTGCATTGGTTGATCGGGTTCTTCAAACTGATCACTAATCAT
CCTATCGTCTATTAAGTCCGCTGGAAGATTCTTCAAAAACCATACATGATTCCTGATTTCAGGCATTGTGATCCTCTGTGCCGGATCTCCAACAA
AGATCCTTGAGATTAAGTGGCGACATTCCTCAGATATCTGAATGTTCTCAGGAACAGAATACTGCACGCTC
AAGAAATAATTCATGGGCAGACTAAAAGCCCCTTTCAGGATAAGAACTTGACTAATTACAAACATTGTAAATACCCCATTTTCATGTTACTGAGC
TTCAACAATCTCTAAGCCTTGCACACCAACAAGTCCAGAAATGTTCTAAGATTGTGGATACACCTTCCTTTTCACAAGCTTGGCATGCACTCACA
TTGCATATATGATCTCCCCGCTGCTATCAATATCAAGATCAGGCTCTGAATCCAAGTCATCCATGTCATCGTCCATCATTTCCAAGTTATACAAG
CCAATTGGTGGTACTGTTGCCTCTGAGATTATTTGCATGATCGTATCAATGCTCTGCATTGGTTGATCGGGTTCTTCAAACTGATCACTAATCAT
CCTATCGTCTATTAAGTCCGCTGGAAGATTCTTCAAAAACCATACATGATTCCTGATTTCAGGCATTGTGATCCTCTGTGCCGGATCTCCAACAA
AGATCCTTGAGATTAAGTGGCGACATTCCTCAGATATCTGAATGTTCTCAGGAACAGAATACTGCACGCTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246083] | SGN-U586079 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T59935 [Download] [View] | Facility Assigned ID: TMGGA43TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0027 | Quality Trim Threshold: 20.5 |
Working
