EST details — SGN-E246569
| Search information |
| Request: 246569 | Match: SGN-E246569 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C27764 | Clone name: cLEF-45-H15 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176739 is on microarray TOM1: SGN-S1-1-8.4.9.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176739 [TUS-24-L17] | Trace: SGN-T193396 | EST: SGN-E392070 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246569 | Length: 652 bp (859 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E246569 [] (trimmed)
GCGCACTGAATCCAGACTGTTGTGATGGGAAGGGAGAGAGATTGACATATGATACTCGCACCAATCTGACACTTTTTCGTTCATTTACAGCAGCA
GACTATGTTGCTTCTCAGCGGCTTAGGCGGAGGTTAATGTATTTCCATATGGAGATTTTCAAGAGGGTGGATATCATTGTGACACCAACAACTGG
CATGACAGCACCCATAATTCCACCAAGTGCTCTTAAAGTTGGGGAGACTAATATGCAAGTTACAGGAAATCTTATGCGGTTCATTATAACAGCAA
ATCTTCTGGGACTTCCTGCAGTTACTGTCCCTGTTGGTTATGACAAGCAAGGGCTTCCCATAGGTATACAACTCATTGGCCGGCCCTGGTGTGAA
GCTTCCATTTTGCGCTTGGCGGCTGCAATTGAGGAAACTTGTGCTGAGCCCAAGAAGAAACCACTGCAATATTATGACATTCTGAAAGGGAACTA
GAAATCAAGCTTAGCCTGCAGGAGCCCGGGGTAAACAGTAATGTGGATTATGAAGCTTTAAGAAGATGTGAATTCATTTATCAAGACTTTGGTGA
TTCATAGAAACCACCTTGAAAATTGAACGTACTGAGTTTGCGGTACCACTTTATGAAATAAAGCTGATGAAAAGGTTTTGGC
GACTATGTTGCTTCTCAGCGGCTTAGGCGGAGGTTAATGTATTTCCATATGGAGATTTTCAAGAGGGTGGATATCATTGTGACACCAACAACTGG
CATGACAGCACCCATAATTCCACCAAGTGCTCTTAAAGTTGGGGAGACTAATATGCAAGTTACAGGAAATCTTATGCGGTTCATTATAACAGCAA
ATCTTCTGGGACTTCCTGCAGTTACTGTCCCTGTTGGTTATGACAAGCAAGGGCTTCCCATAGGTATACAACTCATTGGCCGGCCCTGGTGTGAA
GCTTCCATTTTGCGCTTGGCGGCTGCAATTGAGGAAACTTGTGCTGAGCCCAAGAAGAAACCACTGCAATATTATGACATTCTGAAAGGGAACTA
GAAATCAAGCTTAGCCTGCAGGAGCCCGGGGTAAACAGTAATGTGGATTATGAAGCTTTAAGAAGATGTGAATTCATTTATCAAGACTTTGGTGA
TTCATAGAAACCACCTTGAAAATTGAACGTACTGAGTTTGCGGTACCACTTTATGAAATAAAGCTGATGAAAAGGTTTTGGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246569] | SGN-U575683 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T61304 [Download] [View] | Facility Assigned ID: TMGGW44TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 12.5 |
Working
