EST details — SGN-E246885
| Search information |
| Request: 246885 | Match: SGN-E246885 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26708 | Clone name: cLEF-41-F17 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176420 is on microarray TOM1: SGN-S1-1-7.3.10.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176420 [TUS-23-O10] | Trace: SGN-T181175 | EST: SGN-E369137 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176420 [TUS-23-O10] | Trace: SGN-T181176 | EST: SGN-E369138 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246885 | Length: 500 bp (944 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246885 [] (trimmed)
GAAAAAATGATTCGGAAGATGAGTCGAGTTCTGATGAATCTGAATCTGATTTTTACTCTGCATCTGAAGACTTGGCAGAAGCCCCTACTAAAGAT
GATGAGATCTTGGGGCTTTCTTCTGAAGACTCGGAAGATGATGACTATAATCCTGATGATCCAGATAAGGATGAGCCGGTTAAAACAGAAAGTTC
AAGTTCTGATTTTACGTCCGACTCTGAGGATTTTAGTCTGATAGTTGATACTAATAGGTTGCGAGGTGATGAACAAGGGGTTTCCAGCTCAGTAG
ATAACAGTATGCCAAACTCGGTTTCCCTAAAGGAAAAAGCTAAAGTTGGCAAAGCTAAAGGGAATTCGCTGAAGGATGAGTTGTCTTATCTTATG
CAGTCTGATAGCCCTCTTGTCTCTGCCAAAAGGCACATAGAGAGGTTGGACTACAAAAAGCTGCACGATGAAACATATGGAAATGGGTCTTCTGA
TTCTAGTGATGAAGATTATGATGAT
GATGAGATCTTGGGGCTTTCTTCTGAAGACTCGGAAGATGATGACTATAATCCTGATGATCCAGATAAGGATGAGCCGGTTAAAACAGAAAGTTC
AAGTTCTGATTTTACGTCCGACTCTGAGGATTTTAGTCTGATAGTTGATACTAATAGGTTGCGAGGTGATGAACAAGGGGTTTCCAGCTCAGTAG
ATAACAGTATGCCAAACTCGGTTTCCCTAAAGGAAAAAGCTAAAGTTGGCAAAGCTAAAGGGAATTCGCTGAAGGATGAGTTGTCTTATCTTATG
CAGTCTGATAGCCCTCTTGTCTCTGCCAAAAGGCACATAGAGAGGTTGGACTACAAAAAGCTGCACGATGAAACATATGGAAATGGGTCTTCTGA
TTCTAGTGATGAAGATTATGATGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246885] | SGN-U576071 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60300 [Download] [View] | Facility Assigned ID: TMGGG33TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0106 | Quality Trim Threshold: 14.5 |
Working
