EST details — SGN-E247001
| Search information |
| Request: 247001 | Match: SGN-E247001 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26694 | Clone name: cLEF-41-E24 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176414 is on microarray TOM1: SGN-S1-1-5.3.11.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176414 [TUS-23-O4] | Trace: SGN-T181251 | EST: SGN-E369213 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176414 [TUS-23-O4] | Trace: SGN-T181252 | EST: SGN-E369214 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247001 | Length: 577 bp (1016 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247001 [] (trimmed)
ATTTTTTTCATCACCTAAAGAACCCCTTTTCATACCCAATTCAGCCCAATCGCCGCCGTGCGTTGTTTTCTTCTTCACCGTCAATGGAATCAGCT
GCTGTGACGGTTGAGTCAGTTGCTGACAAATTGAAGAAGCAGAGTTTGGGAAATGATGGAAGTAACAGTAAACGTTTGTTGAAACTTGAAGAGCT
CAATTGGGATCATTCATTTGTTCGTGAACTGCCTGCTGATCCAAGAACAGATACCATTCCAAGAGAGGTATTGCATGCATGCTATACGAAAATGT
TGCCTTCTGTTGAGGTGGAGAATCCTCAGCTCGTTGTGTGGTCAGACTCAGTAGCTGAGTTACTTGAGTTGGATCCTAAAGAATTTGAGAGGCCT
GATTTTCCACTTCTGTTCTCAGGGGCATCACCTTTAGTTGGAGCTGTGCCTTATGCCCAGAACTATGGAGGACATCAGTTTGGGATGTGGGCTGG
TCAGCTAGGTGATGGTCGAGCAATAACTCTTGGAGAGGTTTTGAATTCAAAGTCTGAAAGATGGGAGCTGCAGCTAAAGGGTGCAGGGAAGACCC
CATATAG
GCTGTGACGGTTGAGTCAGTTGCTGACAAATTGAAGAAGCAGAGTTTGGGAAATGATGGAAGTAACAGTAAACGTTTGTTGAAACTTGAAGAGCT
CAATTGGGATCATTCATTTGTTCGTGAACTGCCTGCTGATCCAAGAACAGATACCATTCCAAGAGAGGTATTGCATGCATGCTATACGAAAATGT
TGCCTTCTGTTGAGGTGGAGAATCCTCAGCTCGTTGTGTGGTCAGACTCAGTAGCTGAGTTACTTGAGTTGGATCCTAAAGAATTTGAGAGGCCT
GATTTTCCACTTCTGTTCTCAGGGGCATCACCTTTAGTTGGAGCTGTGCCTTATGCCCAGAACTATGGAGGACATCAGTTTGGGATGTGGGCTGG
TCAGCTAGGTGATGGTCGAGCAATAACTCTTGGAGAGGTTTTGAATTCAAAGTCTGAAAGATGGGAGCTGCAGCTAAAGGGTGCAGGGAAGACCC
CATATAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247001] | SGN-U582267 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60416 [Download] [View] | Facility Assigned ID: TMGGF36TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0032 | Quality Trim Threshold: 14.5 |
Working
