EST details — SGN-E247055
Search information |
Request: 247055 | Match: SGN-E247055 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C26754 | Clone name: cLEF-41-H23 |
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Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176437 is on microarray TOM1: SGN-S1-1-6.4.11.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C176437 [TUS-23-P3] | Trace: SGN-T181330 | EST: SGN-E368403 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E247055 | Length: 510 bp (972 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247055 [] (trimmed)
ACACCACCGTCTAATTTGTAAATATATTCGCCGGAAACTTCTCTATCCACGCTTTCTCTATATCTATCATACCCTTTTTCTTAATTAATCGGTTG
CTATTCCTTTGATGGCAGCGATTACGCAGAGAAAAGATTCGGATCGGATCAAAGGTCCATGGAGTCCTGAAGAGGACGAGTTGTTGCAGACGCTT
GTTGAGAAACATGGACCTAGAAACTGGACTTTGATAAGCAAATCGGTGCCGGGTCGATCTGGTAAATCCTGTCGTCTCCGGTGGTGTAATCAGCT
TTCACCTCAAGTGGAACATCGTGCTTTTACTCCTGAAGAAGATGATACGATCATCAGGGCTCATGCCAAGTTTGGTAATAAATGGGCGACTATTG
CCCGTTTGTTATCGGGTCGGACTGATAACGCTATAAAGAACCATTGGAACTCTACTCTTAAACGTAAGTGTCCTTCCATGTCCGAAGATTTAAGC
TTTGAAACCCCTCAACCGCCTTTGAAAAGATCGTC
CTATTCCTTTGATGGCAGCGATTACGCAGAGAAAAGATTCGGATCGGATCAAAGGTCCATGGAGTCCTGAAGAGGACGAGTTGTTGCAGACGCTT
GTTGAGAAACATGGACCTAGAAACTGGACTTTGATAAGCAAATCGGTGCCGGGTCGATCTGGTAAATCCTGTCGTCTCCGGTGGTGTAATCAGCT
TTCACCTCAAGTGGAACATCGTGCTTTTACTCCTGAAGAAGATGATACGATCATCAGGGCTCATGCCAAGTTTGGTAATAAATGGGCGACTATTG
CCCGTTTGTTATCGGGTCGGACTGATAACGCTATAAAGAACCATTGGAACTCTACTCTTAAACGTAAGTGTCCTTCCATGTCCGAAGATTTAAGC
TTTGAAACCCCTCAACCGCCTTTGAAAAGATCGTC
Unigenes |
Current Unigene builds | |||||
[SGN-E247055] | SGN-U582039 | Tomato 200607 | Build 2 | 29 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T60470 [Download] [View] | Facility Assigned ID: TMGGG48TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.984 | Expected Error Rate: 0.0071 | Quality Trim Threshold: 14.5 |