EST details — SGN-E247507
| Search information |
| Request: 247507 | Match: SGN-E247507 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C27133 | Clone name: cLEF-42-K15 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176625 is on microarray TOM1: SGN-S1-1-2.3.9.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176625 [TUS-24-G23] | Trace: SGN-T192961 | EST: SGN-E391635 | Direction: 5' | Facility: INRA |
| Clone: SGN-C176625 [TUS-24-G23] | Trace: SGN-T193194 | EST: SGN-E391868 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247507 | Length: 640 bp (956 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247507 [] (trimmed)
CTTGTCAATGCCATCAAGAATAAGCTTCATGATTTGACAAGGGATCACTCTGCTTTTCTCGATAAATTTCCGAAAAACATTAGGATGCGTGTTGA
TGTCCTCAGAGATATTCAGAGCCAATATAATGAATTAGAGGCACAGTACCTTGAGGAGAAGGCAGCTCTGGAAGCAAAGTTCCACAAGTTGTATG
AGCCACTTTACAACAAGCGATGTGAGATTGTGAATGGCGTGGGTGAAGCTGGAGATGAAAGTACAGTAGGAGAAGAAACAAATGAATCAGCAGGA
GATAAAGGTATTCCCCATTTCTGGTTGTTGGCAATGAAAAATAATGAAATAATCGCGAAAGAGATTACTGAGAAAGATGAAGATGCCCTCCAGTA
TCTCAAAGATATCAAATGGAATAGACTTGATGATGCCAATGGTTTTAAGCTTGAGTTCTTTTTTGAGACAAATCCCTATTTCAGCAACAATGTGC
TGACAAAGACGTATCACATGATCAGCGAAGATGAACATATTCTAGAGAATGCAATAGGGACAGAGATAGAATGGTTTCTGGGGAAATGTTTGACA
CAGAAGATCCTAAAGAAGAAGCCAAAGAAAGGATCCAACGATACGAAGCTTATCATAAAAACTGAGGAAT
TGTCCTCAGAGATATTCAGAGCCAATATAATGAATTAGAGGCACAGTACCTTGAGGAGAAGGCAGCTCTGGAAGCAAAGTTCCACAAGTTGTATG
AGCCACTTTACAACAAGCGATGTGAGATTGTGAATGGCGTGGGTGAAGCTGGAGATGAAAGTACAGTAGGAGAAGAAACAAATGAATCAGCAGGA
GATAAAGGTATTCCCCATTTCTGGTTGTTGGCAATGAAAAATAATGAAATAATCGCGAAAGAGATTACTGAGAAAGATGAAGATGCCCTCCAGTA
TCTCAAAGATATCAAATGGAATAGACTTGATGATGCCAATGGTTTTAAGCTTGAGTTCTTTTTTGAGACAAATCCCTATTTCAGCAACAATGTGC
TGACAAAGACGTATCACATGATCAGCGAAGATGAACATATTCTAGAGAATGCAATAGGGACAGAGATAGAATGGTTTCTGGGGAAATGTTTGACA
CAGAAGATCCTAAAGAAGAAGCCAAAGAAAGGATCCAACGATACGAAGCTTATCATAAAAACTGAGGAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247507] | SGN-U564809 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60551 [Download] [View] | Facility Assigned ID: TMGGI68TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.944 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 14.5 |
Working
