EST details — SGN-E248362
| Search information |
| Request: 248362 | Match: SGN-E248362 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32398 | Clone name: cLEG-1-E7 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183413 is on microarray TOM1: SGN-S1-1-6.2.1.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183413 [TUS-42-B19] | Trace: SGN-T195072 | EST: SGN-E393746 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183413 [TUS-42-B19] | Trace: SGN-T195072 | EST: SGN-E399341 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183413 [TUS-42-B19] | Trace: SGN-T196067 | EST: SGN-E394741 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183413 [TUS-42-B19] | Trace: SGN-T200339 | EST: SGN-E399342 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E248362 | Length: 586 bp (859 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E248362 [] (trimmed)
CTGAGGCATGCAAGACTTTTGATCAAGCTAAGGAGGAAAGTTTGCAGGAGTTTGAAGAGAAGAAGACTGAGCTTGATCCCAAAGTTGTTGAAATT
TATTAAGCTGCTGCGGTTGAGATCAAGAGCTTAGTGAAGGAACCAAAGGGTGCAGGGCTGAAGAAAAACTCAGATGGGGTTCAGAAATTCCTTGA
TGACCTTGTCAAGATTGAATTTCCGGGATCAAAAGCTGTTAGCGAAGCAAGTTCAAACTTTGGGCCTTCCTATGTATCGGGCCCAATTATTTTTG
TGTTCGAAAAAGTTTCCACTTTCATAGTCACAGAAGATAAGAAGGAAGAGGAACCCGCGGCTGCTGATGACGTGCATGCACCAGCCGCCACGTCA
ACTGAAGAGGTGGAGGTGAAGGTGAAGGAGAAGGAGAAGGAGATAGTTATTGAGTCTGGAGAACCAAACAAGGAAGAAGCACCTGCTACTGTTGT
TGCTGACGTGGCACCTGCAACTAAGGTGGAAGAAGCACCAAAGGTGGTTTAATCATCGTATACGTCTAAAAATTTGCATCTTTATCTTCTTCTTT
TTTTTTAATGTGTCAT
TATTAAGCTGCTGCGGTTGAGATCAAGAGCTTAGTGAAGGAACCAAAGGGTGCAGGGCTGAAGAAAAACTCAGATGGGGTTCAGAAATTCCTTGA
TGACCTTGTCAAGATTGAATTTCCGGGATCAAAAGCTGTTAGCGAAGCAAGTTCAAACTTTGGGCCTTCCTATGTATCGGGCCCAATTATTTTTG
TGTTCGAAAAAGTTTCCACTTTCATAGTCACAGAAGATAAGAAGGAAGAGGAACCCGCGGCTGCTGATGACGTGCATGCACCAGCCGCCACGTCA
ACTGAAGAGGTGGAGGTGAAGGTGAAGGAGAAGGAGAAGGAGATAGTTATTGAGTCTGGAGAACCAAACAAGGAAGAAGCACCTGCTACTGTTGT
TGCTGACGTGGCACCTGCAACTAAGGTGGAAGAAGCACCAAAGGTGGTTTAATCATCGTATACGTCTAAAAATTTGCATCTTTATCTTCTTCTTT
TTTTTTAATGTGTCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E248362] | SGN-U580472 | Tomato 200607 | Build 2 | 105 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T64425 [Download] [View] | Facility Assigned ID: TBFAA28TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0153 | Quality Trim Threshold: 12.5 |
Working
