EST details — SGN-E248831
| Search information |
| Request: 248831 | Match: SGN-E248831 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C28856 | Clone name: cLEF-49-G7 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C177022 is on microarray TOM1: SGN-S1-1-5.4.8.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177022 [TUS-25-H12] | Trace: SGN-T182134 | EST: SGN-E369645 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177022 [TUS-25-H12] | Trace: SGN-T182135 | EST: SGN-E369646 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E248831 | Length: 597 bp (848 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E248831 [] (trimmed)
CTTTCTGAAAGGTACTCATCAATGTGTAGATTGTTCAATTACCAGGAGCTTTGTTCAGCAACATCTGATTTCCTGCCAGAGAATTTGATTGGAAA
AGGAGGCAGCAGTCAGGTTTACAAAGGGTGCCTTCCAGATGGCAAGCAACTGGCTGTGAAAATATTGAAGCCATCAGAAGCTGTGGCCCAGCAAT
TCCGGTCAGAGATAGAGATACTCACAACTCTGCATCACAAGCACATTATATCACTGTTTGGTTTTTGCTTGGAGGAGAACAACCTTTTACTGGTT
TATGATCTATTATCCAGAGGAAGCTTAGAAGAGAATCTCCATGGTTCCAAAAAGGATGAAAATACATTTAGCTGGGTAGATAGATACAAAGTCGC
TTTGGGTGTTGCTGAGGCACTGGACCACCTACACAATGCAGCTGATGGGCCCATAATCCACAGGGATGTGAAATCTTCAAACATTCTCCTGTCCG
ATGATTCTGAGCCACAGCTTTCAGATTTTGGACTTGCAACACCAGCCTCAAGCTGTTCAAATCATTTAGATAGCATTGATGTTGCTGGAACTTTT
GGCTACTTGGCTCCTGAGTACTTTATG
AGGAGGCAGCAGTCAGGTTTACAAAGGGTGCCTTCCAGATGGCAAGCAACTGGCTGTGAAAATATTGAAGCCATCAGAAGCTGTGGCCCAGCAAT
TCCGGTCAGAGATAGAGATACTCACAACTCTGCATCACAAGCACATTATATCACTGTTTGGTTTTTGCTTGGAGGAGAACAACCTTTTACTGGTT
TATGATCTATTATCCAGAGGAAGCTTAGAAGAGAATCTCCATGGTTCCAAAAAGGATGAAAATACATTTAGCTGGGTAGATAGATACAAAGTCGC
TTTGGGTGTTGCTGAGGCACTGGACCACCTACACAATGCAGCTGATGGGCCCATAATCCACAGGGATGTGAAATCTTCAAACATTCTCCTGTCCG
ATGATTCTGAGCCACAGCTTTCAGATTTTGGACTTGCAACACCAGCCTCAAGCTGTTCAAATCATTTAGATAGCATTGATGTTGCTGGAACTTTT
GGCTACTTGGCTCCTGAGTACTTTATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E248831] | SGN-U563034 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T62339 [Download] [View] | Facility Assigned ID: TMGHK40TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0066 | Quality Trim Threshold: 14.5 |
Working
