EST details — SGN-E248846
Search information |
Request: 248846 | Match: SGN-E248846 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C28944 | Clone name: cLEF-49-K9 |
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Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C177076 is on microarray TOM1: SGN-S1-1-7.2.8.11
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E248846 | Length: 553 bp (850 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E248846 [] (trimmed)
ACCAACCGACGCTCCATTATTTTGAGAAGAAGCCTTTCTTCTTCATCATCAATTTTCAGCTCATTCCTCTGCACCTTCCTTTTTTTTTTGTATTG
TAATATACACATATTGCGTTTTATTTTTGTTGATTAGATATTGATATTCAGAGATCGAATTGCTCTGCTATTGTAATTTTTTTTTGAAAAAAATA
TGGATGAATTTGGCGTTTTGGTTGAGAGATATGGCGTCAAAGTTCAAGGAGGCAAGTCAACGCCCATGGCTAATTTGAAGGCGAAAAACAATTCC
AGCAATGGTTTTCCGTCGAATCTCGGGTTTAATTCGGGTCAAAACACCGGGTATAGCTCTGGGGATCCATTTGCGGATGATCTCGATGGAATTTT
CAGGTCTAAGGCTTCGCCGAACTACGATGATAATGATATTTTTGGAGGTGTGTTTGCAAATTCAAAGCAGCAGCAGAATAATGTGGATATTGAAT
CAGTATTGGGAGGTTCGAGTTCGGGTAATAATAATAACTATGCTAGTNAGAATGTGAATGATGATTTTGATTTGTTTG
TAATATACACATATTGCGTTTTATTTTTGTTGATTAGATATTGATATTCAGAGATCGAATTGCTCTGCTATTGTAATTTTTTTTTGAAAAAAATA
TGGATGAATTTGGCGTTTTGGTTGAGAGATATGGCGTCAAAGTTCAAGGAGGCAAGTCAACGCCCATGGCTAATTTGAAGGCGAAAAACAATTCC
AGCAATGGTTTTCCGTCGAATCTCGGGTTTAATTCGGGTCAAAACACCGGGTATAGCTCTGGGGATCCATTTGCGGATGATCTCGATGGAATTTT
CAGGTCTAAGGCTTCGCCGAACTACGATGATAATGATATTTTTGGAGGTGTGTTTGCAAATTCAAAGCAGCAGCAGAATAATGTGGATATTGAAT
CAGTATTGGGAGGTTCGAGTTCGGGTAATAATAATAACTATGCTAGTNAGAATGTGAATGATGATTTTGATTTGTTTG
Unigenes |
Current Unigene builds | |||||
[SGN-E248846] | SGN-U576934 | Tomato 200607 | Build 2 | 31 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T62354 [Download] [View] | Facility Assigned ID: TMGHK65TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.956 | Expected Error Rate: 0.0111 | Quality Trim Threshold: 14.5 |