EST details — SGN-E249427

Search information 
Request: 249427Match: SGN-E249427
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C29072Clone name: cLEF-50-B16
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C182389 is on microarray TOM1: SGN-S1-1-6.4.8.14
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C182389 [TUS-39-H3] Trace: SGN-T199537 EST: SGN-E398211 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E249427Length: 523 bp (944 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E249427 [] (trimmed) TTTTTTCAGAATATTAGAAGTTTCATTAGTAAGAATACTGAGAGTTTTTTTTTTGTTGTTGAAAAAAGGGAAGTGATGAAGTGAAAACCCGGATT
TGCCCCTTAATCACCTCTAGTTTTGTGGTGGTCGGGGTGGGGGTTGGTGCCGGAGATCGGAAAAAACTGAAAACAGGTTGCAATGTGGTGGCGGT
TTATTTAATCAGGTTGTGGGTGCATTGGGTTTTTGGTTAATTTGGGTTTGTTGATGATACCAATGCATGTGAGGGGAAATGGAGTTTCGGATAAG
AAGAAGATGATGCCTATTCTTGGGATCTGCATGTGGGGGAACCATAAGATCTCAGTATTGGATTGGTTTTGCTCTCCAAGAGAGGATGTCTATAT
TTATTCTTTCTTCTGGTTTATGATTAGCGTTGGTGCTGAAATAATGATTTAATATAGTAAATGGGCTGAAGACGACTTGCTCAATGTTGAGGACG
TTAGCATCAACTTTGTTGGTTTTGGCCTTCTTTGTTTCCTTATCGGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E249427] SGN-U581695 Tomato 200607 Build 2 44 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T62935 [Download] [View] Facility Assigned ID: TMGHR08TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.943 Expected Error Rate: 0.0075 Quality Trim Threshold: 14.5