EST details — SGN-E250458
| Search information |
| Request: 250458 | Match: SGN-E250458 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32330 | Clone name: cLEG-18-K15 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180629 is on microarray TOM1: SGN-S1-1-6.2.19.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180629 [TUS-34-N19] | Trace: SGN-T187101 | EST: SGN-E375199 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180629 [TUS-34-N19] | Trace: SGN-T187102 | EST: SGN-E375200 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E250458 | Length: 683 bp (843 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E250458 [] (trimmed)
GAACTACCACGCCGAATTTGCATTGACTTCTCTTCGTCTCCGGCACTGTTTTTACGAGAATCCATGGGTACTTCCGACGTTAATGCTAACTCCTC
CTCCTCTTCCCTCGTCAAAGATTTCCTCCACAAATGCGGTGGCGTTGCCGTGATTGACGGCGGATTTGCGACGGAGCTGGAGCGTCATGGAGCCG
ACCTTAATGACCCTCTTTGGAGCGCTAAATGTCTCCTCACTGACCCTCACCTTGTCCGCGCTGTACACTTGGATTACCTTGAAGCTGGTGCAGAT
ATAATACTCAGTTCATCTTATCAGGCAACCATCCAGGGGTTTAAGGCCAAAGGATATTCTATAGAAGAAAGTGAATCCTTACTCAAAAGAAGTGT
TGAGATTGCATGTGAAGCACGTGATGTCTACTATAAAAGATGCCGTGAATCTTCCTCTGATCAAAGCACTGATGGGAAGGTTCTCAAACAACGCC
CTATCTTAGTTGCAGCATCTGTTGGGAGTTATGGGGCCTATTTAGCTGACGGTTCAGAATACAGTGGGGAATATGGGGATGCGGTTGATCTCAAG
TTTCTAAAGGATTTTCATCGTAGAAGGGTTCATCTTCTTGCAAACTCTGGTGCTGATCTAATAGCTTTTGAGACCGTGCCAAATAAACTGGAAGC
TCAGGCTTTTGTCGAGCT
CTCCTCTTCCCTCGTCAAAGATTTCCTCCACAAATGCGGTGGCGTTGCCGTGATTGACGGCGGATTTGCGACGGAGCTGGAGCGTCATGGAGCCG
ACCTTAATGACCCTCTTTGGAGCGCTAAATGTCTCCTCACTGACCCTCACCTTGTCCGCGCTGTACACTTGGATTACCTTGAAGCTGGTGCAGAT
ATAATACTCAGTTCATCTTATCAGGCAACCATCCAGGGGTTTAAGGCCAAAGGATATTCTATAGAAGAAAGTGAATCCTTACTCAAAAGAAGTGT
TGAGATTGCATGTGAAGCACGTGATGTCTACTATAAAAGATGCCGTGAATCTTCCTCTGATCAAAGCACTGATGGGAAGGTTCTCAAACAACGCC
CTATCTTAGTTGCAGCATCTGTTGGGAGTTATGGGGCCTATTTAGCTGACGGTTCAGAATACAGTGGGGAATATGGGGATGCGGTTGATCTCAAG
TTTCTAAAGGATTTTCATCGTAGAAGGGTTCATCTTCTTGCAAACTCTGGTGCTGATCTAATAGCTTTTGAGACCGTGCCAAATAAACTGGAAGC
TCAGGCTTTTGTCGAGCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E250458] | SGN-U582642 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T67232 [Download] [View] | Facility Assigned ID: TBFCQ68TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.987 | Expected Error Rate: 0.0074 | Quality Trim Threshold: 14.5 |
Working
