EST details — SGN-E250494
| Search information |
| Request: 250494 | Match: SGN-E250494 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32287 | Clone name: cLEG-18-E1 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183056 is on microarray TOM1: SGN-S1-1-3.3.3.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183056 [TUS-41-C22] | Trace: SGN-T196486 | EST: SGN-E395160 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183056 [TUS-41-C22] | Trace: SGN-T196487 | EST: SGN-E395161 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E250494 | Length: 687 bp (839 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E250494 [] (trimmed)
GTTTTAGACAACCAAGGTTTTCTTGCTCAGAATGTCTGTTGCCTTGTTATGGGTTGTTTCTCCTTGTGACGTCTCAAATGGGACAAGTTTCATGG
AATCAGTCCGGGAGGGAAACCGTTTTTTTGATTCATCGAGGCATAGGAATTTGGTGTCCAATGAGAGAATCAATAGAGGTGGTGGAAAGCAAACT
AATAATGGACGGAAATTTTCTGTACGGTCTGCTATTTTGGCTACTCCATCTGGAGAACGGACGATGACATCGGAACAGATGGTCTATGATGTGGT
TTTGAGGCAGGCAGCCTTGGTGAAGAGGCAACTGAGATCTACCAATGAGTTAGAAGTGAAGCCGGATATACCTATTCCGGGGAATTTGGGCTTGT
TGAGTGAAGCATATGATAGGTGTGGTGAAGTATGTGCAGAGTATGCAAAGACGTTTAACTTAGGAACTATGCTAATGACTCCCGAGAGAAGAAGG
GCTATCTGGGCAATATATGTATGGTGCAGAAGAACAGATGAACTTGTTGATGGCCCAAACGCATCATATATTACCCCGGCAGCCTTAGATAGGTG
GGAAAATAGGCTAGAAGATGTTTTCAATGGGCGGCCATTTGACATGCTCGATGGTGCTTTGTCCGATACAGTTTCTAACTTTCCAGTTGATATTC
AGCCATTCAGAGATATGATTGA
AATCAGTCCGGGAGGGAAACCGTTTTTTTGATTCATCGAGGCATAGGAATTTGGTGTCCAATGAGAGAATCAATAGAGGTGGTGGAAAGCAAACT
AATAATGGACGGAAATTTTCTGTACGGTCTGCTATTTTGGCTACTCCATCTGGAGAACGGACGATGACATCGGAACAGATGGTCTATGATGTGGT
TTTGAGGCAGGCAGCCTTGGTGAAGAGGCAACTGAGATCTACCAATGAGTTAGAAGTGAAGCCGGATATACCTATTCCGGGGAATTTGGGCTTGT
TGAGTGAAGCATATGATAGGTGTGGTGAAGTATGTGCAGAGTATGCAAAGACGTTTAACTTAGGAACTATGCTAATGACTCCCGAGAGAAGAAGG
GCTATCTGGGCAATATATGTATGGTGCAGAAGAACAGATGAACTTGTTGATGGCCCAAACGCATCATATATTACCCCGGCAGCCTTAGATAGGTG
GGAAAATAGGCTAGAAGATGTTTTCAATGGGCGGCCATTTGACATGCTCGATGGTGCTTTGTCCGATACAGTTTCTAACTTTCCAGTTGATATTC
AGCCATTCAGAGATATGATTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E250494] | SGN-U580527 | Tomato 200607 | Build 2 | 240 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T67268 [Download] [View] | Facility Assigned ID: TBFCQ25TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0047 | Quality Trim Threshold: 14.5 |
Working
