EST details — SGN-E252071

Search information 
Request: 252071Match: SGN-E252071
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C45557Clone name: cLEG-8-F6
cartOrder Clone
Library Name: cLEGOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: breaker fruit

Microarray: Alias clone SGN-C180335 is on microarray TOM1: SGN-S1-1-4.2.19.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C180335 [TUS-34-B13] Trace: SGN-T187037 EST: SGN-E375135 Direction: 3' Facility: INRA
Clone: SGN-C180335 [TUS-34-B13] Trace: SGN-T187038 EST: SGN-E375136 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E252071Length: 602 bp (1020 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E252071 [] (trimmed) TGTCATAGAACTCCTTATTTGATTCTCCAACTTTTCAACTATATAAAACCTATCCCTCTGTTTTTGACTCAATCGAAAAAACAGAGACAATGGGT
GAAGAAACGAAACAGGAGCCACCAAAGGAAGAAGTAAAAACAGAGGAAGAGCAAACAGAGCCAAAACCACCTTCGCCTTTTGTTTTGTACGTTGA
CTTGCATTGTGTTGGATGTGCAAAGAAAATTGAGAGGTCCATTTCAAAGATTAGAGGGGTTGAGGGAGTAGTAATAGAAATGGCGAAAAACACAG
TGACAATAAAGGGAGTAATAGAGCCACAAGCAGTGTGCGACAGAATTACGAAGAAAACTAAAAGAGTTGCAAAAGTGTTATCACCCCTGCCGGCT
GCTGAAGGTGAACCAATTCCTCAAGTGGTTGCTTCACAGGTAAGTGGATTGACTACTGTGGAGCTTAATGTCAACATGCATTGTGAGGCTTGCGC
CGAGCAACTTAAAAAAAAGATTCTCAGAATGAAAGGTGTTAGAAGTGCGGAAACAGAAGCCAGCACTGGCAAAGTAACGGTGACGGGCACTATGG
ACGCTAACAAACTCGTCGACTACGTCTATCGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E252071] SGN-U568708 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T65327 [Download] [View] Facility Assigned ID: TBFBF27TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0024 Quality Trim Threshold: 14.5