EST details — SGN-E252365
Search information |
Request: 252365 | Match: SGN-E252365 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C31235 | Clone name: cLEG-12-K9 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180479 is on microarray TOM1: SGN-S1-1-4.4.19.9
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E252365 | Length: 472 bp (883 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E252365 [] (trimmed)
AATTAAAAATATTTATATTTAATCAAATTTTTAAAACAGTAAAGGGGGGCAAAATGGTAATACAACAATTCATTTTCGAACTTCCCCATATAATA
ATATATGAAATATGATAACAGACAAACAAATCTAGCATAAGGCAGTATTTAGCTTCAAAATAAGAGATCAAGCACGATCATCTTGTTGTTTAAAC
ATTATCCACTGAAGCAAGCGCTGCTGGTGTTGCTGGTGCAGCTGAAGCTATGGTAAACTGTACACTTCTCGGCTGTCCAGAGTGTAACACAACTG
CAAATTGTGTTGCTGCCAATGCTGCAGCTTCCTCTCTTTGTCTGCGCTGCTGCAAGATGCTGATGGCCCAAAGCATGATGTAGCAGGGTAAAAGA
AAGCCAACTGCCCGGAGTAAGAAAAGCGAAAAGAAAGCAGTTGGATCTTCATCATCTCCATCTGTATCTGTCATTGGTAATGCATGGCGCAA
ATATATGAAATATGATAACAGACAAACAAATCTAGCATAAGGCAGTATTTAGCTTCAAAATAAGAGATCAAGCACGATCATCTTGTTGTTTAAAC
ATTATCCACTGAAGCAAGCGCTGCTGGTGTTGCTGGTGCAGCTGAAGCTATGGTAAACTGTACACTTCTCGGCTGTCCAGAGTGTAACACAACTG
CAAATTGTGTTGCTGCCAATGCTGCAGCTTCCTCTCTTTGTCTGCGCTGCTGCAAGATGCTGATGGCCCAAAGCATGATGTAGCAGGGTAAAAGA
AAGCCAACTGCCCGGAGTAAGAAAAGCGAAAAGAAAGCAGTTGGATCTTCATCATCTCCATCTGTATCTGTCATTGGTAATGCATGGCGCAA
Unigenes |
Current Unigene builds | |||||
[SGN-E252365] | SGN-U573343 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T66175 [Download] [View] | Facility Assigned ID: TBFBS65TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.952 | Expected Error Rate: 0.0106 | Quality Trim Threshold: 12.5 |