EST details — SGN-E252697
| Search information |
| Request: 252697 | Match: SGN-E252697 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C31933 | Clone name: cLEG-16-E2 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180581 is on microarray TOM1: SGN-S1-1-6.4.19.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180581 [TUS-34-L19] | Trace: SGN-T187174 | EST: SGN-E375272 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180581 [TUS-34-L19] | Trace: SGN-T187175 | EST: SGN-E375273 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E252697 | Length: 562 bp (804 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E252697 [] (trimmed)
AATTAAAAATATTTATATTTAATCAAATTTTTAAAACAGTAAAGGGGGGCAAAATGGTAATACAACAATTCATTTTCGAACTTCCCCATATAATA
ATATATGAAATATGATAACAGACAAACAAATTTAGCATAAGGCAGTATTTAGCTTCAAAATAAGAGATCAAGCACGATCATCTTGTTGTTTAAAC
ATTATCCACTGAAGCAGGCGCTGCTGGTGTTGCTGGTGCATCTGAAGCTATGGTAAACTGTACACTTCTCGGCTGTCCAGAGTGTAACACAACTG
CAAATTGTGTTGCTGCCAATGCTGCAGCTTCCTCTCTTTGTCTGCGCTGCTGCAAGATGCTGATGGCCCATAGCATGATGTAGCAGGGTAAAAGA
AAGCCAACTGCCCGGAGTAAGAAAAGCGAAAAGAAAGCAGTTGGATCTTCATCATCTCCATCTGTATCTGTCATTGGTAATGCATGGCGCAATAG
TAGAAGAGCCATCAAAATTAAAGCAGCCGATCGAAAGAAAGCTGCACCACTTGCATTTGCAGAATTGTAATCATCATATTCAGCTTC
ATATATGAAATATGATAACAGACAAACAAATTTAGCATAAGGCAGTATTTAGCTTCAAAATAAGAGATCAAGCACGATCATCTTGTTGTTTAAAC
ATTATCCACTGAAGCAGGCGCTGCTGGTGTTGCTGGTGCATCTGAAGCTATGGTAAACTGTACACTTCTCGGCTGTCCAGAGTGTAACACAACTG
CAAATTGTGTTGCTGCCAATGCTGCAGCTTCCTCTCTTTGTCTGCGCTGCTGCAAGATGCTGATGGCCCATAGCATGATGTAGCAGGGTAAAAGA
AAGCCAACTGCCCGGAGTAAGAAAAGCGAAAAGAAAGCAGTTGGATCTTCATCATCTCCATCTGTATCTGTCATTGGTAATGCATGGCGCAATAG
TAGAAGAGCCATCAAAATTAAAGCAGCCGATCGAAAGAAAGCTGCACCACTTGCATTTGCAGAATTGTAATCATCATATTCAGCTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E252697] | SGN-U573343 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T66853 [Download] [View] | Facility Assigned ID: TBFCJ25TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.952 | Expected Error Rate: 0.0179 | Quality Trim Threshold: 12.5 |
Working
