EST details — SGN-E252857
| Search information |
| Request: 252857 | Match: SGN-E252857 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32056 | Clone name: cLEG-16-M14 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180585 is on microarray TOM1: SGN-S1-1-2.4.19.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180585 [TUS-34-L23] | Trace: SGN-T187176 | EST: SGN-E375274 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180585 [TUS-34-L23] | Trace: SGN-T187177 | EST: SGN-E375275 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E252857 | Length: 627 bp (932 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E252857 [] (trimmed)
TGTTATATACAGGGGGTGGAGTTAGAGGGTAAGTTACGCATTTAGTCGTAACTTTAGTCAAACTTCGTAATAATTTAAAATTCAGAGTGGCCATT
GTTGAAAGAGAGGGTGGAATTTGTAAGTCAAGAAACAGGTTACTCCTGTTTGAGTGAGGAAAAGTTGGTTTGCCTGTCTGTGGTCTTTTTATAAT
CTTTTTCTACAGAAGAGAAAGTGGGTAATTTTGTTTGAGAGTGGAAATATTCTCTAGTGGGAATCTACTAGGAGTAATTTATTTTCTATAAACTA
AGTAAAGTTTGGAAGGTGACAAAAAGAAAGACAAAAATCTTGGAATTGTTTTAGACAACCAAGGTTTTCTTGCTCAGAATGTCTGTTGCCTTGTT
ATGGGTTGTTTCTCCTTGTGACGTCTCAAATGGGACAAGTTTCATGGAATCAGTCCGGGAGGGAAACCGTTTTTTTGATTCATCGAGGCATAGGA
ATTTGGTGTCCAATGAGAGAATCAATAGAGGTGGTGGAAAGCAAACTAATAATGGACGGAAATTTTCTGTACGGTCTGCTATTTTGGCTACTCCA
TCTGGAGAACGGACGATGACATCGGAACAGATGGTCTATGATGTGGTTTTGAGGCAN
GTTGAAAGAGAGGGTGGAATTTGTAAGTCAAGAAACAGGTTACTCCTGTTTGAGTGAGGAAAAGTTGGTTTGCCTGTCTGTGGTCTTTTTATAAT
CTTTTTCTACAGAAGAGAAAGTGGGTAATTTTGTTTGAGAGTGGAAATATTCTCTAGTGGGAATCTACTAGGAGTAATTTATTTTCTATAAACTA
AGTAAAGTTTGGAAGGTGACAAAAAGAAAGACAAAAATCTTGGAATTGTTTTAGACAACCAAGGTTTTCTTGCTCAGAATGTCTGTTGCCTTGTT
ATGGGTTGTTTCTCCTTGTGACGTCTCAAATGGGACAAGTTTCATGGAATCAGTCCGGGAGGGAAACCGTTTTTTTGATTCATCGAGGCATAGGA
ATTTGGTGTCCAATGAGAGAATCAATAGAGGTGGTGGAAAGCAAACTAATAATGGACGGAAATTTTCTGTACGGTCTGCTATTTTGGCTACTCCA
TCTGGAGAACGGACGATGACATCGGAACAGATGGTCTATGATGTGGTTTTGAGGCAN
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E252857] | SGN-U580527 | Tomato 200607 | Build 2 | 240 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T67013 [Download] [View] | Facility Assigned ID: TBFCJ79TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.939 | Expected Error Rate: 0.0017 | Quality Trim Threshold: 14.5 |
Working
