EST details — SGN-E253533
| Search information |
| Request: 253533 | Match: SGN-E253533 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32974 | Clone name: cLEG-24-M22 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C185122 is on microarray TOM1: SGN-S1-1-1.1.11.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185122 [TUS-46-I24] | Trace: SGN-T196590 | EST: SGN-E395264 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185122 [TUS-46-I24] | Trace: SGN-T199005 | EST: SGN-E397679 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E253533 | Length: 585 bp (952 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E253533 [] (trimmed)
AGCTAAATTCTCCATTTTTCTTCCTTATTTTTTTTACAAATTTTATTCATGGCATCCACTGGGCACACCAATCTGAATGCAAAACTTGTATTGTT
AGGTGACATGGGAGCTGGTAAATCAAGCTTGGTTATACGATTCATAAAGGGCCAATTCCTTGAATTTCAAGAATCGACGATTGGGGCGGCTTTCT
TTTCGTCTACATTGGCAGTTAATAATGCTACGGTGAAGTTTGAGATATGGGATACTGCTGGGCAGGAGAGGTACCATAGCTTAGCACCTATGTAT
TATAGAGGCGCTGCAGCTGCTATTATTGTCTATGATATCACTAGCTCGGATTCATTTGCAAAGGCAAAGAAATGGGTGCAAGAATTGCAGAAGCA
AGGTAATTCTAACATGATCATGGCTCTTGCTGGCAATAAGGCAGATCTAGAAGATCGAAGGAACGTTCCTGCAGAAGAGGCACGCTTGTATGCAG
AGGAAAATGGCCTCTTTTTCATGGAGACCTCTGCCAAAACTGCTGCGAATGTCAATGATATTTTCTATGAAATAGCTAAACGGTTGCCTACAGCT
CAACCCACTCAAAAT
AGGTGACATGGGAGCTGGTAAATCAAGCTTGGTTATACGATTCATAAAGGGCCAATTCCTTGAATTTCAAGAATCGACGATTGGGGCGGCTTTCT
TTTCGTCTACATTGGCAGTTAATAATGCTACGGTGAAGTTTGAGATATGGGATACTGCTGGGCAGGAGAGGTACCATAGCTTAGCACCTATGTAT
TATAGAGGCGCTGCAGCTGCTATTATTGTCTATGATATCACTAGCTCGGATTCATTTGCAAAGGCAAAGAAATGGGTGCAAGAATTGCAGAAGCA
AGGTAATTCTAACATGATCATGGCTCTTGCTGGCAATAAGGCAGATCTAGAAGATCGAAGGAACGTTCCTGCAGAAGAGGCACGCTTGTATGCAG
AGGAAAATGGCCTCTTTTTCATGGAGACCTCTGCCAAAACTGCTGCGAATGTCAATGATATTTTCTATGAAATAGCTAAACGGTTGCCTACAGCT
CAACCCACTCAAAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E253533] | SGN-U578324 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T67781 [Download] [View] | Facility Assigned ID: TBFDP83TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0159 | Quality Trim Threshold: 14.5 |
Working
