EST details — SGN-E253888

Search information 
Request: 253888Match: SGN-E253888
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C33800Clone name: cLEG-28-E6
cartOrder Clone
Library Name: cLEGOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: breaker fruit

Microarray: Alias clone SGN-C180524 is on microarray TOM1: SGN-S1-1-7.2.19.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E253888Length: 614 bp (967 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E253888 [] (trimmed) TTTTTAATAAATAATGGTGCATGAATTTATATTACTGAAAGTTTTCCTTTCAAAGAATCCAGAAACTTCACACAAAAAGTGAAGAAAATAATTTT
TTTTTTTAAAAAGTAAATCAACATTCACAGAACTAGTCATTGGATCTATAAGACTTGATACCATACTGTTAAAGACTTTTAAGTATAAGTGATCT
TCGATACAATTACATACTTTTTTTCGTAAAGACGGTCTTTTGAATAGTGCATTATAGTTGTGGTGTCGCGATCAATTTGGCTCTCAAATCTTTCC
TTAGTATCTTTCCAGATGGAGACTTTGGAATCGCGTGAATAAAATACACCTTGTGCAATTTTTTATAGAATACCACCTCCTCTAGCCATATTAAT
AATTTCAAGAACCCTTTTTTGAACTCTAAAACTCCAATGGAAAATCAGAGTTTTTCAATGTTATCTGCTTCTAAACCTCAAAATGGAGCTGTAAT
TCAAGATTCTTCTTTTCAGGGAAGTGAATCATTCTTCAGGAGTGTGTTGGGGAACATGGAAACCATATATCTGAATAAAAACCCCACTGCTAAAG
CTATTTTGGAGCTCGTTCGTTCTGCTGATGATGATCAAATTTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E253888] SGN-U578380 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T68653 [Download] [View] Facility Assigned ID: TBFEF27TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.946 Expected Error Rate: 0.0104 Quality Trim Threshold: 14.5