EST details — SGN-E254000
Search information |
Request: 254000 | Match: SGN-E254000 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C35308 | Clone name: cLEG-34-G17 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E254000 | Length: 492 bp (916 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E254000 [] (trimmed)
TGCCCTTCTGCATTTAATGAAATAACTCCAGCACTGCTTCTTAAGGATGCTGCGTATGGTGCTGCCGCATACATTTACTATGAGCTCTCGAACTA
TCTGAGTTTCAAGGATTGGTTCAATGGAGCCTTATCATTGGAGTTGACGAATGATCATCCCAATATGCGGATAATCCACAGAAAAGTAGCACTAA
TCCTTGGACAATGGGTTTCAGAGATTAAAGATGACACCAGAAGAGCCGTTTATTGTGCTCTAATCACATTACTTCAGGAGAGTGACTTGTGTGTA
AGGCTGACCGCATGCCGGTCGTTGTATTATCATATTGAAGATGCAACTTTTAATGAGAATGAGTTCTTAGATCTTCTTCCGGTTTGTTGGGATCT
GTGTTTCAAAGTGGTGGATGAAGTACAGGAATTTGACTCAAAGGTTCAAGTTCTGAATACTATTTCTGTTCTGATAGCACGTGTTACTGAAATTA
CACCATATGCAAACAAG
TCTGAGTTTCAAGGATTGGTTCAATGGAGCCTTATCATTGGAGTTGACGAATGATCATCCCAATATGCGGATAATCCACAGAAAAGTAGCACTAA
TCCTTGGACAATGGGTTTCAGAGATTAAAGATGACACCAGAAGAGCCGTTTATTGTGCTCTAATCACATTACTTCAGGAGAGTGACTTGTGTGTA
AGGCTGACCGCATGCCGGTCGTTGTATTATCATATTGAAGATGCAACTTTTAATGAGAATGAGTTCTTAGATCTTCTTCCGGTTTGTTGGGATCT
GTGTTTCAAAGTGGTGGATGAAGTACAGGAATTTGACTCAAAGGTTCAAGTTCTGAATACTATTTCTGTTCTGATAGCACGTGTTACTGAAATTA
CACCATATGCAAACAAG
Unigenes |
Current Unigene builds | |||||
[SGN-E254000] | SGN-U563182 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T70058 [Download] [View] | Facility Assigned ID: TBFFC45TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0065 | Quality Trim Threshold: 14.5 |