EST details — SGN-E255279
Search information |
Request: 255279 | Match: SGN-E255279 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C34205 | Clone name: cLEG-30-C1 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183503 is on microarray TOM1: SGN-S1-1-4.2.1.3
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C183503 [TUS-42-F13] | Trace: SGN-T200352 | EST: SGN-E399364 | Direction: 5' | Facility: INRA |
Clone: SGN-C183503 [TUS-42-F13] | Trace: SGN-T200471 | EST: SGN-E399592 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E255279 | Length: 562 bp (876 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255279 [] (trimmed)
AACTTGTTCCTCTCCCGCCGGCTATCCAGTTGATATAGCAAGTTTTGATTGATGGGTGTGATTGAATTATGCAACATTTCATCTATTAGCATTGT
TAGAGCAAAACCCAGTTCTTTAAACGAAGGGAATCGGAGGAGGAGAATTGCTTGTATGGCCTCTTCAGTGTCAGTGCAAGAAGAGGAGAGCCATC
AGCAGAAACAAGGTGTAAATGGGGGTTCTTTTATTCGGACCCATCTTCTTAAATTGTCCCCTTACCAACCCATTTTGCCATTTGAGGTCTTGTCC
ACTCGTCTTGGTAGAAAGCCTGAGGACATTGTGAAATTAGACGCTAACGAAAACCCCTATGGACCTCCTCCAGAGGTAAACGAAGCTTTGGGGTC
TATGAAATTTCCATACATTTATCCTGATCCTGAAAGCCGCACGCTGCGTGCAGCTCTTGCTGAAGATTCTGGCCTTGAATCTGAGTATATTCTTG
CAGGGTGCGGTGCAGATGAACTCATTGATTTGATAATGAGATGCATATTGGATCCTGGTGACAAGATTGTTGACTGCCCACCCACTT
TAGAGCAAAACCCAGTTCTTTAAACGAAGGGAATCGGAGGAGGAGAATTGCTTGTATGGCCTCTTCAGTGTCAGTGCAAGAAGAGGAGAGCCATC
AGCAGAAACAAGGTGTAAATGGGGGTTCTTTTATTCGGACCCATCTTCTTAAATTGTCCCCTTACCAACCCATTTTGCCATTTGAGGTCTTGTCC
ACTCGTCTTGGTAGAAAGCCTGAGGACATTGTGAAATTAGACGCTAACGAAAACCCCTATGGACCTCCTCCAGAGGTAAACGAAGCTTTGGGGTC
TATGAAATTTCCATACATTTATCCTGATCCTGAAAGCCGCACGCTGCGTGCAGCTCTTGCTGAAGATTCTGGCCTTGAATCTGAGTATATTCTTG
CAGGGTGCGGTGCAGATGAACTCATTGATTTGATAATGAGATGCATATTGGATCCTGGTGACAAGATTGTTGACTGCCCACCCACTT
Unigenes |
Current Unigene builds | |||||
[SGN-E255279] | SGN-U574459 | Tomato 200607 | Build 2 | 24 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T69005 [Download] [View] | Facility Assigned ID: TBFEM13THB |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.984 | Expected Error Rate: 0.0055 | Quality Trim Threshold: 14.5 |