EST details — SGN-E256654
| Search information |
| Request: 256654 | Match: SGN-E256654 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C36959 | Clone name: cLEG-40-I5 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180688 is on microarray TOM1: SGN-S1-1-3.1.17.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180688 [TUS-35-A6] | Trace: SGN-T193593 | EST: SGN-E392267 | Direction: 5' | Facility: INRA |
| Clone: SGN-C180688 [TUS-35-A6] | Trace: SGN-T193844 | EST: SGN-E392518 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E256654 | Length: 554 bp (669 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E256654 [] (trimmed)
GAGGAAAGGGTATCATAACATTATCAAGTAACAACACTTCGACAAAGGGTATGAGAAACATTACCAAGTATACCAACTTGGGCAAAAAGCAAAAT
GAAAAACTATTAGAAAAAAGACCATGGCCGTTTACCAGCCACCTCCACCTCTTCTGTCTTGCCTCAAGTGGACGTTGTATTACTCCTTTGACCGG
TCATTCCTCTTGTGTGTGGTCACTTGCTTTTAGTGGTGAAGGTTCACTTCTTGCATCGGGCTCTGCGGATTGCACTGTAAAATTATGGGATGTAA
CCACAAGCACCAGAGCGCCACTAAAAGAAGAGAACAAATCTGGAGGTAACAATAGGCTTCGGTTATTGAAGACCCTACCTACCAAAGCTACACCA
ATCTATGCTTTGCACTTTTCACGAAGAAATCTTTTATTTGCTGCTGGAGCTTTCTCGAAAAGTGCACGAGTCCCTTGCTTTAAAGTCTCTTGACG
TGAGATTACATCATGGTTCCCTTGCAAATTTTGGTGCAATCATCAATGGCAAGTTTTACTTCTCAAGACCTCGGTTTTG
GAAAAACTATTAGAAAAAAGACCATGGCCGTTTACCAGCCACCTCCACCTCTTCTGTCTTGCCTCAAGTGGACGTTGTATTACTCCTTTGACCGG
TCATTCCTCTTGTGTGTGGTCACTTGCTTTTAGTGGTGAAGGTTCACTTCTTGCATCGGGCTCTGCGGATTGCACTGTAAAATTATGGGATGTAA
CCACAAGCACCAGAGCGCCACTAAAAGAAGAGAACAAATCTGGAGGTAACAATAGGCTTCGGTTATTGAAGACCCTACCTACCAAAGCTACACCA
ATCTATGCTTTGCACTTTTCACGAAGAAATCTTTTATTTGCTGCTGGAGCTTTCTCGAAAAGTGCACGAGTCCCTTGCTTTAAAGTCTCTTGACG
TGAGATTACATCATGGTTCCCTTGCAAATTTTGGTGCAATCATCAATGGCAAGTTTTACTTCTCAAGACCTCGGTTTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E256654] | SGN-U563410 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T71623 [Download] [View] | Facility Assigned ID: TBFGA51TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0018 | Quality Trim Threshold: 14.5 |
Working
