EST details — SGN-E256673
| Search information |
| Request: 256673 | Match: SGN-E256673 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C36823 | Clone name: cLEG-40-A10 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C181037 is on microarray TOM1: SGN-S1-1-6.3.17.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C181037 [TUS-35-O19] | Trace: SGN-T187444 | EST: SGN-E375676 | Direction: 3' | Facility: INRA |
| Clone: SGN-C181037 [TUS-35-O19] | Trace: SGN-T187445 | EST: SGN-E375677 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E256673 | Length: 531 bp (1023 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E256673 [] (trimmed)
CGCAGTGAAGGGATCCAATACAAGAAGAATGAAGTATTTTTGGATGTTGTGGAGAGTGTTAATATACTTGTTAATAGCAATGGGCAAATAGTGAG
GTCAGATGTTGTCGGTGCATTGAAGATGCGGACATACTTGAGTGGTATGCCGGAGTGTAAGCTTGGTCTGAATGATAGAGTATTGCTGGAAGCAC
AAGGACGTAATGCTAAGGGGAAGGCTATTGATCTAGATGATATCAAGTTTCATCAGTGTGTGCGTTTGGCCCGATTTGAGAATGATCGTACTATA
TCATTCATACCTCCTGATGGAGCTTTCGAAGTTATGACCTACAGACTCAGTACACAGGTAAAGCCTCTTGTGTGGGTAGAAGCCCAAGTGGAAAG
ACATTCTAAGAGCCGCGTGGAAATTCTGGTTAAAGCACGAAGCCAGTTCAAGGAGAGAAGCACTGCAACTAACGTTCAAATTGAGTTGCCCGTTC
CAACTGATGCAACTAATCCAGATGTTCGTACATCAATGGGATCATCTACTTATGCA
GTCAGATGTTGTCGGTGCATTGAAGATGCGGACATACTTGAGTGGTATGCCGGAGTGTAAGCTTGGTCTGAATGATAGAGTATTGCTGGAAGCAC
AAGGACGTAATGCTAAGGGGAAGGCTATTGATCTAGATGATATCAAGTTTCATCAGTGTGTGCGTTTGGCCCGATTTGAGAATGATCGTACTATA
TCATTCATACCTCCTGATGGAGCTTTCGAAGTTATGACCTACAGACTCAGTACACAGGTAAAGCCTCTTGTGTGGGTAGAAGCCCAAGTGGAAAG
ACATTCTAAGAGCCGCGTGGAAATTCTGGTTAAAGCACGAAGCCAGTTCAAGGAGAGAAGCACTGCAACTAACGTTCAAATTGAGTTGCCCGTTC
CAACTGATGCAACTAATCCAGATGTTCGTACATCAATGGGATCATCTACTTATGCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E256673] | SGN-U582355 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T71642 [Download] [View] | Facility Assigned ID: TBFGB05TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0128 | Quality Trim Threshold: 14.5 |
Working
