EST details — SGN-E258862
Search information |
Request: 258862 | Match: SGN-E258862 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C37344 | Clone name: cLEG-41-M19 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177388 is on microarray TOM1: SGN-S1-1-7.3.6.4
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C177388 [TUS-26-G18] | Trace: SGN-T182423 | EST: SGN-E368290 | Direction: 3' | Facility: INRA |
Clone: SGN-C177388 [TUS-26-G18] | Trace: SGN-T182424 | EST: SGN-E368291 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E258862 | Length: 512 bp (916 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E258862 [] (trimmed)
CAGACTTCCCTTTCATAGCCATCTTTCAAAAATGGCAATTAGAACCATTTCAAGACTAAAAATTCCATCTTTGCTTCTTAAACACCTTTCAGTTT
CTCCATTACCATCAATTTCTTCCACCTTAACATCTTCTTCTTCATGTTCTCCATCATGGGTTCCTGAGTTTTCTAGAAGTTCAGTGAGGGATGTG
AGGTGGTACCATGATGGAAGACCAAGAGGGTCACTTTGGAGGGGAAAGAAATTGATTGGAAAAGAAGCACTTTTTGTGATTCTTGGGTTAAGAAG
ATTCAAAGATGATGAAGAAAAGCTTGACAAGTTTGTTAAAACACATGTCCTTAGACTTCTTAAAATGGATATGATTGCTGTACTTAATGAACTTG
AACGCCAAGAAGAAGTCTCTCTTGCTGTTAAGGTGTTTTGGGTAATTCAGAAACAAGCCTGGTACCAACCCGATGTCTATCTTTACAAGGACCTG
ATCATTGCGTTGGCGAGACGGAGAAAAATGGATGATG
CTCCATTACCATCAATTTCTTCCACCTTAACATCTTCTTCTTCATGTTCTCCATCATGGGTTCCTGAGTTTTCTAGAAGTTCAGTGAGGGATGTG
AGGTGGTACCATGATGGAAGACCAAGAGGGTCACTTTGGAGGGGAAAGAAATTGATTGGAAAAGAAGCACTTTTTGTGATTCTTGGGTTAAGAAG
ATTCAAAGATGATGAAGAAAAGCTTGACAAGTTTGTTAAAACACATGTCCTTAGACTTCTTAAAATGGATATGATTGCTGTACTTAATGAACTTG
AACGCCAAGAAGAAGTCTCTCTTGCTGTTAAGGTGTTTTGGGTAATTCAGAAACAAGCCTGGTACCAACCCGATGTCTATCTTTACAAGGACCTG
ATCATTGCGTTGGCGAGACGGAGAAAAATGGATGATG
Unigenes |
Current Unigene builds | |||||
[SGN-E258862] | SGN-U578087 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T71894 [Download] [View] | Facility Assigned ID: TBFGE82TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.951 | Expected Error Rate: 0.0149 | Quality Trim Threshold: 14.5 |