EST details — SGN-E258862
| Search information |
| Request: 258862 | Match: SGN-E258862 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C37344 | Clone name: cLEG-41-M19 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177388 is on microarray TOM1: SGN-S1-1-7.3.6.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177388 [TUS-26-G18] | Trace: SGN-T182423 | EST: SGN-E368290 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177388 [TUS-26-G18] | Trace: SGN-T182424 | EST: SGN-E368291 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E258862 | Length: 512 bp (916 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E258862 [] (trimmed)
CAGACTTCCCTTTCATAGCCATCTTTCAAAAATGGCAATTAGAACCATTTCAAGACTAAAAATTCCATCTTTGCTTCTTAAACACCTTTCAGTTT
CTCCATTACCATCAATTTCTTCCACCTTAACATCTTCTTCTTCATGTTCTCCATCATGGGTTCCTGAGTTTTCTAGAAGTTCAGTGAGGGATGTG
AGGTGGTACCATGATGGAAGACCAAGAGGGTCACTTTGGAGGGGAAAGAAATTGATTGGAAAAGAAGCACTTTTTGTGATTCTTGGGTTAAGAAG
ATTCAAAGATGATGAAGAAAAGCTTGACAAGTTTGTTAAAACACATGTCCTTAGACTTCTTAAAATGGATATGATTGCTGTACTTAATGAACTTG
AACGCCAAGAAGAAGTCTCTCTTGCTGTTAAGGTGTTTTGGGTAATTCAGAAACAAGCCTGGTACCAACCCGATGTCTATCTTTACAAGGACCTG
ATCATTGCGTTGGCGAGACGGAGAAAAATGGATGATG
CTCCATTACCATCAATTTCTTCCACCTTAACATCTTCTTCTTCATGTTCTCCATCATGGGTTCCTGAGTTTTCTAGAAGTTCAGTGAGGGATGTG
AGGTGGTACCATGATGGAAGACCAAGAGGGTCACTTTGGAGGGGAAAGAAATTGATTGGAAAAGAAGCACTTTTTGTGATTCTTGGGTTAAGAAG
ATTCAAAGATGATGAAGAAAAGCTTGACAAGTTTGTTAAAACACATGTCCTTAGACTTCTTAAAATGGATATGATTGCTGTACTTAATGAACTTG
AACGCCAAGAAGAAGTCTCTCTTGCTGTTAAGGTGTTTTGGGTAATTCAGAAACAAGCCTGGTACCAACCCGATGTCTATCTTTACAAGGACCTG
ATCATTGCGTTGGCGAGACGGAGAAAAATGGATGATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E258862] | SGN-U578087 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T71894 [Download] [View] | Facility Assigned ID: TBFGE82TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0149 | Quality Trim Threshold: 14.5 |
Working
