EST details — SGN-E259039
| Search information |
| Request: 259039 | Match: SGN-E259039 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C37352 | Clone name: cLEG-41-M5 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177393 is on microarray TOM1: SGN-S1-1-2.3.6.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177393 [TUS-26-G23] | Trace: SGN-T182217 | EST: SGN-E368807 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177393 [TUS-26-G23] | Trace: SGN-T182218 | EST: SGN-E368808 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259039 | Length: 518 bp (900 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259039 [] (trimmed)
GGTGAGGAAGTTCTTGCTGAAATACCCTTCAATGGATTTGATGATCAACCCCTTGCAAAGTGGTTTGAAGAAATACAGGCTCCAACTTCTATTGA
TGGATTGAGAGTTTCACCTGCATGTAGCCCGAAGCGATGTGCTGAGATGAGGGAGAAACAAGACATGCCCATGCAAACTCCTGCCAACAGGACTC
CAGCAACCCATATTGAAACACAGAGCTTGCCATTTGTGAAAAATACACTACTTTGGTCAACTATTGAAGCCATGGATATATTCAAGAGGATTCCT
CAGAAGCCACATTTCACTCCATTGGAACAGTCTAAAGAGAGCTCCCGTGAAGGACAAGCTATAGGTTATATGGTAACTTTTTTAAGCATAGTAGA
GAGGACTTCTAGACTTCAGTTTGACGATCCTAGAAGCACCTTTGAGGAAATCATGGAGACTCTCACCGACTTGGAAACCCATGGATTTAATGTTC
AAGCTGTACGAGATCGTCTAAGTGAGTTACTGGTGATGAAAGA
TGGATTGAGAGTTTCACCTGCATGTAGCCCGAAGCGATGTGCTGAGATGAGGGAGAAACAAGACATGCCCATGCAAACTCCTGCCAACAGGACTC
CAGCAACCCATATTGAAACACAGAGCTTGCCATTTGTGAAAAATACACTACTTTGGTCAACTATTGAAGCCATGGATATATTCAAGAGGATTCCT
CAGAAGCCACATTTCACTCCATTGGAACAGTCTAAAGAGAGCTCCCGTGAAGGACAAGCTATAGGTTATATGGTAACTTTTTTAAGCATAGTAGA
GAGGACTTCTAGACTTCAGTTTGACGATCCTAGAAGCACCTTTGAGGAAATCATGGAGACTCTCACCGACTTGGAAACCCATGGATTTAATGTTC
AAGCTGTACGAGATCGTCTAAGTGAGTTACTGGTGATGAAAGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259039] | SGN-U566252 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72071 [Download] [View] | Facility Assigned ID: TBFGE75TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0207 | Quality Trim Threshold: 14.5 |
Working
