EST details — SGN-E259469
| Search information |
| Request: 259469 | Match: SGN-E259469 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C37640 | Clone name: cLEG-42-K3 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177535 is on microarray TOM1: SGN-S1-1-4.1.6.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177535 [TUS-26-M21] | Trace: SGN-T182239 | EST: SGN-E368829 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177535 [TUS-26-M21] | Trace: SGN-T182240 | EST: SGN-E368830 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259469 | Length: 581 bp (911 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259469 [] (trimmed)
CAGTTCCGTCCATCATTTCAAACGGTAATCATCCAAGGTCTGGAAGATCTGGTTCCCGGCACCGTTCTTCACGCTCTAGAGTAATACCTGTTGCT
GGATCTGGTGATAGTGCTGTTCCCATTAACATTGCACATAATGAAAGTGATTCTCAAGCTCTTATGAGTCGGTTCCAGTCAGAGATAGCTACTTC
CCTGACTGCAGCAGCTTCTTCTGAATTACCTTGTACTGTGAAACTCAGAGTGTGGCCTTATGATATTAAGGTTCCATGTGCGCCGCTTGATGCTG
AAAAATGTCGCTTAATTATACCACATGCTGTGCTCTGTAGTGAAATGGGTGCCCACTTTTCACCATGTGGAAGATTTTTAGCAGCTTGTGTTGCT
TGTATTAGTCATGGCATGGAAGCTGATCCTGGTTTCCATGGACAATTTCGTCACGATGCTGCAACTTCACCTACCAGACATCCAATTGCAGCCCA
CCCGGTTATGTATGAGCTACGTATATATTCCTTGGAGGAGGCAAATTTTGGTAGGGTGCTTGCATCTCGACTAATTAGAGCTGCTCATTGTTTGA
CTTCAATTCAG
GGATCTGGTGATAGTGCTGTTCCCATTAACATTGCACATAATGAAAGTGATTCTCAAGCTCTTATGAGTCGGTTCCAGTCAGAGATAGCTACTTC
CCTGACTGCAGCAGCTTCTTCTGAATTACCTTGTACTGTGAAACTCAGAGTGTGGCCTTATGATATTAAGGTTCCATGTGCGCCGCTTGATGCTG
AAAAATGTCGCTTAATTATACCACATGCTGTGCTCTGTAGTGAAATGGGTGCCCACTTTTCACCATGTGGAAGATTTTTAGCAGCTTGTGTTGCT
TGTATTAGTCATGGCATGGAAGCTGATCCTGGTTTCCATGGACAATTTCGTCACGATGCTGCAACTTCACCTACCAGACATCCAATTGCAGCCCA
CCCGGTTATGTATGAGCTACGTATATATTCCTTGGAGGAGGCAAATTTTGGTAGGGTGCTTGCATCTCGACTAATTAGAGCTGCTCATTGTTTGA
CTTCAATTCAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259469] | SGN-U583184 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72230 [Download] [View] | Facility Assigned ID: TBFGI62TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0029 | Quality Trim Threshold: 14.5 |
Working
