EST details — SGN-E259629
| Search information |
| Request: 259629 | Match: SGN-E259629 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C37629 | Clone name: cLEG-42-K15 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177531 is on microarray TOM1: SGN-S1-1-8.1.6.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177531 [TUS-26-M17] | Trace: SGN-T182312 | EST: SGN-E368902 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177531 [TUS-26-M17] | Trace: SGN-T182313 | EST: SGN-E368903 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259629 | Length: 550 bp (934 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259629 [] (trimmed)
GCAGTTCCGCATGCGGGGTCTTTTTTTGGGGTTGAGTGTAGGCAAACCTTACCGGGGCCTTGGCTGGTAGAGAGGCTGTTTCCAATATACCGTCG
GCTCAGTGAAAACAAAAACACAACATTTATGAAGATATAAGCAGTAACAACAACAGGATAACTCTTAATTGTGACACAATATATTCTTATTAGCC
ATATCGTAGCACCAGACTTTGAACCGTACTCCTGAATCCTAGAATTTGTGTAATGAAGAGTCCAACCTCTAGATCAACATCTGTATCAGATGCCC
ACTTTCATAACATGAATGAGCTTAATAGAATTTTGTAAGTCTGTGAATAAAGTAGAAAACATGTATTTGTTGACTTTCTTCTCTACTTATCTAAC
CTTGCTGGGCTGAGACGCCATTTTCTATTTGACAATCTACTTTATTGTTAGTGACCTTGAACTGATACCTACTGGAGTATTGGAGGTGAAACTTG
TTCAAGCAAAATAGTTAACAAACAAGGACATCATTGGTAAATCTGATCCTTTTGCTGAGTTATATGTACGCCCTG
GCTCAGTGAAAACAAAAACACAACATTTATGAAGATATAAGCAGTAACAACAACAGGATAACTCTTAATTGTGACACAATATATTCTTATTAGCC
ATATCGTAGCACCAGACTTTGAACCGTACTCCTGAATCCTAGAATTTGTGTAATGAAGAGTCCAACCTCTAGATCAACATCTGTATCAGATGCCC
ACTTTCATAACATGAATGAGCTTAATAGAATTTTGTAAGTCTGTGAATAAAGTAGAAAACATGTATTTGTTGACTTTCTTCTCTACTTATCTAAC
CTTGCTGGGCTGAGACGCCATTTTCTATTTGACAATCTACTTTATTGTTAGTGACCTTGAACTGATACCTACTGGAGTATTGGAGGTGAAACTTG
TTCAAGCAAAATAGTTAACAAACAAGGACATCATTGGTAAATCTGATCCTTTTGCTGAGTTATATGTACGCCCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259629] | SGN-U585890 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72390 [Download] [View] | Facility Assigned ID: TBFGI68TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0120 | Quality Trim Threshold: 14.5 |
Working
