EST details — SGN-E259659
Search information |
Request: 259659 | Match: SGN-E259659 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C37556 | Clone name: cLEG-42-G4 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177495 is on microarray TOM1: SGN-S1-1-4.4.7.18
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C177495 [TUS-26-L5] | Trace: SGN-T182506 | EST: SGN-E369892 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E259659 | Length: 675 bp (922 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E259659 [] (trimmed)
TGGACATATGACTCATCAGCACCAACATCAAGAAATGCAACCATCTATTGTGGGGCAGAGATCATGTCACTTGAGTGGGAGTGCAAATCTGACCG
ACTGCTTCTCATAGGCACAGCTGATGGAGGAATCAAAGCATGGAATGTCGATGCTAAACGTGTTGTTTGTGATCTTAGTTGCACAGAAGCATTCC
CAAGCGTGTTGGATTTAAAATGCAGCCCTGTGGAGCCAATTTTCGTATCTGCTGCTGCTTCGAGATGGCCTGGTTTGAGTGACATTGGTAAATTG
GGCTATGCTTCTTTAACTGTCTGGAATATGAGGACATGGAAAGCTATGACAGTCCTGCCTCTTGGTGAAGATCCACCTCCAATTACTTCAGTATG
CTTCAATCACAATGGAAAACTTTTAGCAGCTGCAGCTACTGATGGAATGATACACATGTTTGATATGTCTGCTGGCTTGCAAATTACTGGATGGC
CAGCACATGATTCTGCTATTAGTTCTGTTATGTTTGGTTCTGATGAGACGAGCATTTTCACTTTGGGTATAGATGGAAAGATATTTGAGTGGAGT
TTGCAGAATCAAGGCAAAGTACTTTGGTCAAGTGATTGCAGCAGATTCTGTAACCTTAGGAGTTCGTCACACTATAAACATGAAATGGCTCTCGA
TGCTTATGGA
ACTGCTTCTCATAGGCACAGCTGATGGAGGAATCAAAGCATGGAATGTCGATGCTAAACGTGTTGTTTGTGATCTTAGTTGCACAGAAGCATTCC
CAAGCGTGTTGGATTTAAAATGCAGCCCTGTGGAGCCAATTTTCGTATCTGCTGCTGCTTCGAGATGGCCTGGTTTGAGTGACATTGGTAAATTG
GGCTATGCTTCTTTAACTGTCTGGAATATGAGGACATGGAAAGCTATGACAGTCCTGCCTCTTGGTGAAGATCCACCTCCAATTACTTCAGTATG
CTTCAATCACAATGGAAAACTTTTAGCAGCTGCAGCTACTGATGGAATGATACACATGTTTGATATGTCTGCTGGCTTGCAAATTACTGGATGGC
CAGCACATGATTCTGCTATTAGTTCTGTTATGTTTGGTTCTGATGAGACGAGCATTTTCACTTTGGGTATAGATGGAAAGATATTTGAGTGGAGT
TTGCAGAATCAAGGCAAAGTACTTTGGTCAAGTGATTGCAGCAGATTCTGTAACCTTAGGAGTTCGTCACACTATAAACATGAAATGGCTCTCGA
TGCTTATGGA
Unigenes |
Current Unigene builds | |||||
[SGN-E259659] | SGN-U572678 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T72420 [Download] [View] | Facility Assigned ID: TBFGJ38TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0081 | Quality Trim Threshold: 14.5 |