EST details — SGN-E259742
| Search information |
| Request: 259742 | Match: SGN-E259742 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C37483 | Clone name: cLEG-42-D16 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177459 is on microarray TOM1: SGN-S1-1-8.2.6.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177459 [TUS-26-J17] | Trace: SGN-T182582 | EST: SGN-E369968 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177459 [TUS-26-J17] | Trace: SGN-T182583 | EST: SGN-E369969 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259742 | Length: 506 bp (951 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259742 [] (trimmed)
GTAAGATCTCAAGGTCAGCTCAGAAGCTCTCTATAGTCGCCAACCGCTGCTTAGTCAGACATGCAAAGACACGTCCAAAAATGAGCGAAGTCCTG
GAAATGGTGAACAAAGTTGTCGAGACATCAACAGGAATAGGAAACCCTGGACCACCTGTGAGAATCGCGGAACCAACTTCACCAGAATCTACAAG
GAAAGGTAAGAGGAAGGTAGACACCAAACTCGGAGATGGTAGCCGGTTAGTACGTATATGGTCAACAAAGCTTACAAACACTTGTTAATACAATA
GTTTCCAATATGCACAAAGAGAAAACAGAGTTGAAAAGGTAATGAAGAAGCACAGATTATATAACTAGTTCCCAATATGAATGAGGTCTTCTCCA
TTATTGTCTTATATTTATATATAATATAGATGTTTAAATTTATAGAGAAAATCGTAATCATTCAAATGTACATTCAAATTTAGACGTGTTTAACA
AATGAGGCATAAGTGTTGCTATTTGTATGAN
GAAATGGTGAACAAAGTTGTCGAGACATCAACAGGAATAGGAAACCCTGGACCACCTGTGAGAATCGCGGAACCAACTTCACCAGAATCTACAAG
GAAAGGTAAGAGGAAGGTAGACACCAAACTCGGAGATGGTAGCCGGTTAGTACGTATATGGTCAACAAAGCTTACAAACACTTGTTAATACAATA
GTTTCCAATATGCACAAAGAGAAAACAGAGTTGAAAAGGTAATGAAGAAGCACAGATTATATAACTAGTTCCCAATATGAATGAGGTCTTCTCCA
TTATTGTCTTATATTTATATATAATATAGATGTTTAAATTTATAGAGAAAATCGTAATCATTCAAATGTACATTCAAATTTAGACGTGTTTAACA
AATGAGGCATAAGTGTTGCTATTTGTATGAN
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259742] | SGN-U569083 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72503 [Download] [View] | Facility Assigned ID: TBFGL20TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0067 | Quality Trim Threshold: 12.5 |
Working
